RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
TPM3-209ENST00000368527 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
TPM3-209ENST00000368527 IPPQ9Y573 584 aa10.55□□□□□ -0.72
TPM3-209ENST00000368527 USP3Q9Y6I4 520 aa10.55□□□□□ -0.72
TPM3-209ENST00000368527 MANSC4A6NHS7 340 aaPredicted RBP10.54□□□□□ -0.72
TPM3-209ENST00000368527 FOXO6A8MYZ6 492 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CYB561D2O14569 222 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 PPEF2O14830 753 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 GLRA3O75311 464 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 BANF1O75531 89 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 HAUS5O94927 633 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 C1QAP02745 245 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 POLBP06746 335 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CCDC130P13994 396 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CALB2P22676 271 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DNAJB1P25685 340 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 RGS2P41220 211 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 RAB27AP51159 221 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CCNG1P51959 295 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 GBE1Q04446 702 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 GAD2Q05329 585 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 ZBTB16Q05516 673 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 IFRD2Q12894 506 aaPredicted RBP10.54□□□□□ -0.72
TPM3-209ENST00000368527 ILF2Q12905 390 aaKnown RBP10.54□□□□□ -0.72
TPM3-209ENST00000368527 EFTUD2Q15029 972 aaKnown RBP eCLIP10.54□□□□□ -0.72
TPM3-209ENST00000368527 CA9Q16790 459 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CLNKQ7Z7G1 428 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 PIGZQ86VD9 579 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CRLF3Q8IUI8 442 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DEFB106AQ8N104 65 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CCDC110Q8TBZ0 833 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 RNF139Q8WU17 664 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DEPDC1BQ8WUY9 529 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DNAJB3Q8WWF6 145 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 FAM149B1Q96BN6 582 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 RSRC1Q96IZ7 334 aaKnown RBP10.54□□□□□ -0.72
TPM3-209ENST00000368527 FAM111AQ96PZ2 611 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 PPP1R10Q96QC0 940 aaKnown RBP10.54□□□□□ -0.72
TPM3-209ENST00000368527 WWP1Q9H0M0 922 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 C10orf88Q9H8K7 445 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 EBF2Q9HAK2 575 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 NPHS2Q9NP85 383 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 SLCO1B3Q9NPD5 702 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 TXNDC16Q9P2K2 825 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 MID2Q9UJV3 735 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 DSEQ9UL01 958 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 GINS2Q9Y248 185 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 GIT1Q9Y2X7 761 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 MAD1L1Q9Y6D9 718 aa10.54□□□□□ -0.72
TPM3-209ENST00000368527 KAT6AQ92794 2004 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 MGAMO43451 1857 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 EEF2KO00418 725 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 PIK3R2O00459 728 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 CAPN9O14815 690 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 RFPL1O75677 317 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 GABBR2O75899 941 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 KRT16P08779 473 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 ZNF865P0CJ78 1059 aaPredicted RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 FGFR1P11362 822 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 SKIP12755 728 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 MYL4P12829 197 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 GRK2P25098 689 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 CDK7P50613 346 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 INHBEP58166 350 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 KCNJ2P63252 427 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 MRPS6P82932 125 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 ADIGQ0VDE8 80 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 MAPRE1Q15691 268 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 ZRSR2Q15696 482 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 DCAF6Q58WW2 860 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 METTL23Q86XA0 190 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 CEP57Q86XR8 500 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 NUDCD3Q8IVD9 361 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-209ENST00000368527 COLGALT1Q8NBJ5 622 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 GIMAP7Q8NHV1 300 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 E2F7Q96AV8 911 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 NSL1Q96IY1 281 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 SERAC1Q96JX3 654 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 EPAS1Q99814 870 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 LRRC40Q9H9A6 602 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 TRPV2Q9Y5S1 764 aa10.53□□□□□ -0.72
TPM3-209ENST00000368527 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
TPM3-209ENST00000368527 RNF103O00237 685 aa10.52□□□□□ -0.73
TPM3-209ENST00000368527 GPR182O15218 404 aa10.52□□□□□ -0.73
TPM3-209ENST00000368527 SPTLC1O15269 473 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms