RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 SIGLEC16A6NMB1 481 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 TPP1O14773 563 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 FARP2O94887 1054 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 TXNP10599 105 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 RANBP1P43487 201 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 CXCR3P49682 368 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 ZNF132P52740 706 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SLC34A1Q06495 639 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 DEFB107AQ8IZN7 70 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PLD5Q8N7P1 536 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 MAB21L3Q8N8X9 362 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 REPS2Q8NFH8 660 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 PCDH19Q8TAB3 1148 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 C18orf25Q96B23 403 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 TUBGCP5Q96RT8 1024 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 FOXP3Q9BZS1 431 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 ATXN3LQ9H3M9 355 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 WDR55Q9H6Y2 383 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 DRG1Q9Y295 367 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 TIMM13Q9Y5L4 95 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 ADGRA2Q96PE1 1338 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 NUP205Q92621 2012 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 FZD9O00144 591 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 NFASCO94856 1347 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 CYP2F1P24903 491 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 TTC39BQ5VTQ0 682 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 HEATR6Q6AI08 1181 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 RPS27LQ71UM5 84 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 C10orf107Q8IVU9 208 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 NKD2Q969F2 451 aaPredicted RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 ZNF333Q96JL9 665 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 DNAJC1Q96KC8 554 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 FGD4Q96M96 766 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 MRPL45Q9BRJ2 306 aaKnown RBP9.16□□□□□ -0.94
THBS3-201ENST00000368378 XYLT2Q9H1B5 865 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 VCXQ9H320 206 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 EBF3Q9H4W6 596 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 GPRC5DQ9NZD1 345 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 LMCD1Q9NZU5 365 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 STRIP2Q9ULQ0 834 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 RABL2BQ9UNT1 228 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
THBS3-201ENST00000368378 GLTPD2A6NH11 291 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 A8MXQ7 604 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 CLDN5O00501 218 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 GNL1P36915 607 aaPredicted RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 SLC10A2Q12908 348 aaPredicted RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 PAN2Q504Q3 1202 aaKnown RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 DCAF6Q58WW2 860 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 LAYNQ6UX15 382 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
THBS3-201ENST00000368378 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 PQLC3Q8N755 202 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 SLC44A1Q8WWI5 657 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 INPP5DQ92835 1189 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 PHACTR1Q9C0D0 580 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 XAB2Q9HCS7 855 aaKnown RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 APPL1Q9UKG1 709 aa9.15□□□□□ -0.94
THBS3-201ENST00000368378 POLR2AP24928 1970 aaKnown RBP9.15□□□□□ -0.94
THBS3-201ENST00000368378 TCRBV5S1A1TA0A578 114 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 MED7O43513 233 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 OR6B1O95007 311 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 ENO3P13929 434 aaPredicted RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 CYP3A5P20815 502 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 FGFR3P22607 806 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 PEX2P28328 305 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 ZNF460Q14592 562 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 PRKD1Q15139 912 aaPredicted RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 PARP6Q2NL67 630 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 DCAF15Q66K64 600 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 DRICH1Q6PGQ1 229 aaPredicted RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 IYDQ6PHW0 289 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 CAND1Q86VP6 1230 aaKnown RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 TDRPQ86YL5 185 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 MYLK4Q86YV6 388 aaPredicted RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 RNF169Q8NCN4 708 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 STKLD1Q8NE28 680 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 SCYL1Q96KG9 808 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 AGAP2Q99490 1192 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 RSAD1Q9HA92 442 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 KRT82Q9NSB4 513 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 CLIC5Q9NZA1 410 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 CNTN6Q9UQ52 1028 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 MTO1Q9Y2Z2 717 aaKnown RBP9.15□□□□□ -0.95
THBS3-201ENST00000368378 BPTFQ12830 3046 aa9.15□□□□□ -0.95
THBS3-201ENST00000368378 KRT38O76015 456 aa9.14□□□□□ -0.95
THBS3-201ENST00000368378 LSM8O95777 96 aaKnown RBP9.14□□□□□ -0.95
THBS3-201ENST00000368378 PAPOLAP51003 745 aaKnown RBP9.14□□□□□ -0.95
THBS3-201ENST00000368378 MCCD1P59942 119 aaPredicted RBP9.14□□□□□ -0.95
THBS3-201ENST00000368378 HSF5Q4G112 596 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms