RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TFE3P19532 575 aaPredicted RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 MATKP42679 507 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 CXCL12P48061 93 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 RNASE9P60153 205 aaKnown RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 CDK17Q00537 523 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 CSTF1Q05048 431 aaKnown RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 ZC3H12AQ5D1E8 599 aaKnown RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 FAM102AQ5T9C2 384 aaPredicted RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 TERB1Q8NA31 727 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 MSANTD4Q8NCY6 345 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 USP33Q8TEY7 942 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 NELL1Q92832 810 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 ATOH1Q92858 354 aaPredicted RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 NT5C3BQ969T7 300 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 NPY6RQ99463 290 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 C11orf70Q9BRQ4 267 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 NUP58Q9BVL2 599 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 IRF2BPLQ9H1B7 796 aa23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 XPO7Q9UIA9 1087 aaKnown RBP23.32■■□□□ 1.32
ECHDC1-203ENST00000368291 A0A1W2PQJ5 194 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 GOLGA8SH3BPF8 625 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 K7ESF4 209 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 TSPAN3O60637 253 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 PAPSS2O95340 614 aaPredicted RBP23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 FLT3P36888 993 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 PRKCIP41743 596 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 KIR2DL1P43626 348 aaPredicted RBP23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 SGSHP51688 502 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 ASIC2Q16515 512 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 ZNF528Q3MIS6 628 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 EMC10Q5UCC4 262 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 SFMBT2Q5VUG0 894 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 RFWD3Q6PCD5 774 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 PHF13Q86YI8 300 aaPredicted RBP23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 MYEOVQ96EZ4 313 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 HCN2Q9UL51 889 aa23.31■■□□□ 1.32
ECHDC1-203ENST00000368291 HOXD9P28356 352 aaPredicted RBP23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 TNFRSF4P43489 277 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 SLC11A2P49281 568 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 SEC13P55735 322 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 MPPE1Q53F39 396 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 GRAMD4Q6IC98 578 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 MON1BQ7L1V2 547 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 HAUS4Q9H6D7 363 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 FAM204AQ9H8W3 233 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 DDIT4Q9NX09 232 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 VPS13AQ96RL7 3174 aa23.3■■□□□ 1.32
ECHDC1-203ENST00000368291 SYNJ2BP-COX16A0A087WUM0 186 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 TBC1D3BA6NDS4 549 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 KCNU1A8MYU2 1149 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 PRRT4C9JH25 899 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 M0QYT0 321 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 CYBBP04839 570 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 NSFP46459 744 aaKnown RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 DGKGP49619 791 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 GSCP56915 257 aaPredicted RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 C2orf27AQ580R0 203 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 PIK3R6Q5UE93 754 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 RNF43Q68DV7 783 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 ARCQ7LC44 396 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 ZNF571Q7Z3V5 609 aaPredicted RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 PHLDB2Q86SQ0 1253 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 DDI1Q8WTU0 396 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 TMA16Q96EY4 203 aaKnown RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 NUCKS1Q9H1E3 243 aaKnown RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 METTL5Q9NRN9 209 aaKnown RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 SEPT11Q9NVA2 429 aaKnown RBP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 RRN3Q9NYV6 651 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 COX16Q9P0S2 106 aa23.29■■□□□ 1.32
ECHDC1-203ENST00000368291 ATG13O75143 517 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 MOCS2O96007 188 aaPredicted RBP23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 GYPCP04921 128 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 GBP1P32455 592 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 MRPS21P82921 87 aaKnown RBP23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 PREPLQ4J6C6 727 aaPredicted RBP23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 BNIPLQ7Z465 357 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 BTN2A3PQ96KV6 586 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 PRICKLE1Q96MT3 831 aaPredicted RBP23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 TAS2R14Q9NYV8 317 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 ADAM22Q9P0K1 906 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 CAPN11Q9UMQ6 739 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 SLC27A6Q9Y2P4 619 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 ITIH6Q6UXX5 1313 aa23.28■■□□□ 1.32
ECHDC1-203ENST00000368291 TCRBV5S1A1TA0A578 114 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 GJB6O95452 261 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 APOEP02649 317 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 SKILP12757 684 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 TNFAIP3P21580 790 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 TIE1P35590 1138 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 PLA2G5P39877 138 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 NBL1P41271 181 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 NME3Q13232 169 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 C10orf76Q5T2E6 689 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 HGSNATQ68CP4 663 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 ACAD10Q6JQN1 1059 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 SYT13Q7L8C5 426 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 EMC1Q8N766 993 aa23.27■■□□□ 1.32
ECHDC1-203ENST00000368291 IL17RCQ8NAC3 791 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms