RNA–Protein interactions for RNA: ENST00000368202.4

PTPRK-201, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 526 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-201ENST00000368202 ARHGEF38Q9NXL2 777 aa12.63□□□□□ -0.39
PTPRK-201ENST00000368202 ZMYM5Q9UJ78 669 aa12.63□□□□□ -0.39
PTPRK-201ENST00000368202 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
PTPRK-201ENST00000368202 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-201ENST00000368202 hCG_1818297A0A087WSY0 165 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 ZNF487B1APH4 448 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 CCDC188H7C350 402 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 EEF2KO00418 725 aaKnown RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 IRF1P10914 325 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 GJA1P17302 382 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 L1CAMP32004 1257 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 PTPN7P35236 360 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 AVPR1AP37288 418 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 SLC11A2P49281 568 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 EPHA5P54756 1037 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 HYAL1Q12794 435 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 DPYSL3Q14195 570 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 LLGL1Q15334 1064 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 DPYSL2Q16555 572 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 LRRC31Q6UY01 552 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 CYP4V2Q6ZWL3 525 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 GAREM2Q75VX8 874 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 ARL14EPQ8N8R7 260 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 DDX50Q9BQ39 737 aaKnown RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 LRRC3Q9BY71 257 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 DCLK3Q9C098 648 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 RCOR3Q9P2K3 495 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 EFR3BQ9Y2G0 817 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 MRPS23Q9Y3D9 190 aaKnown RBP12.62□□□□□ -0.39
PTPRK-201ENST00000368202 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
PTPRK-201ENST00000368202 SOBPA7XYQ1 873 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 APOL1O14791 398 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 PAGE1O75459 146 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 KRT10P13645 584 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-201ENST00000368202 HTR7P34969 479 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 CDKN2BP42772 138 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 DYNLT1P63172 113 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TUBB4BP68371 445 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
PTPRK-201ENST00000368202 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 EIF4EBP2Q13542 120 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TEAD2Q15562 447 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 CA9Q16790 459 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 ANKRD20A8PQ5CZ79 823 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 PRPF38BQ5VTL8 546 aaKnown RBP12.61□□□□□ -0.39
PTPRK-201ENST00000368202 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 RWDD4Q6NW29 188 aaKnown RBP12.61□□□□□ -0.39
PTPRK-201ENST00000368202 ANKRD54Q6NXT1 300 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TMEM150AQ86TG1 271 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 PYROXD2Q8N2H3 581 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 MICALL1Q8N3F8 863 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 RUNDC3BQ96NL0 473 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 RNF157Q96PX1 679 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 APOL5Q9BWW9 433 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 AP1M1Q9BXS5 423 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 OSBPL2Q9H1P3 480 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 CATSPERBQ9H7T0 1116 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 PRDM16Q9HAZ2 1276 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 SMARCAL1Q9NZC9 954 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 OR12D3Q9UGF7 316 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 CPQQ9Y646 472 aa12.61□□□□□ -0.39
PTPRK-201ENST00000368202 C3orf70A6NLC5 250 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-201ENST00000368202 CST8O60676 142 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 IGLV3-27P01718 113 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 CD48P09326 243 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 GOT1P17174 413 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 CORO1AP31146 461 aaKnown RBP12.6□□□□□ -0.39
PTPRK-201ENST00000368202 ARSEP51690 589 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 NTHL1P78549 312 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 KCNC3Q14003 757 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 GRIN2CQ14957 1233 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 TMEM184AQ6ZMB5 413 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 BZW1Q7L1Q6 419 aaKnown RBP12.6□□□□□ -0.39
PTPRK-201ENST00000368202 CHSY1Q86X52 802 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 SHKBP1Q8TBC3 707 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 P3H4Q92791 437 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 ZNF707Q96C28 371 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-201ENST00000368202 TBC1D31Q96DN5 1066 aa12.6□□□□□ -0.39
PTPRK-201ENST00000368202 C1orf74Q96LT6 269 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms