RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 SLC39A10Q9ULF5 831 aa11.33□□□□□ -0.59
CDC42BPA-205ENST00000366769 SLC16A4O15374 487 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 PDE9AO76083 593 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 NEK3P51956 506 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 DDX39BQ13838 428 aaKnown RBP11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 FNBP1LQ5T0N5 605 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 MCEEQ96PE7 176 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 PLOD3O60568 738 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 GPR63Q9BZJ6 419 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 SAR1AQ9NR31 198 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 GABBR1Q9UBS5 961 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 INPP4BO15327 924 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 RBBP4Q09028 425 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZCCHC8Q6NZY4 707 aaKnown RBP11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 CD302Q8IX05 232 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 FIG4Q92562 907 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 USP17L3A6NCW0 530 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 USP17L4A6NCW7 530 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 AGKQ53H12 422 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 USP17L1Q7RTZ2 530 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 ATPAF2Q8N5M1 289 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 WDR36Q8NI36 951 aaKnown RBP11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 DYNLL2Q96FJ2 89 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 VTA1Q9NP79 307 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 ANKS1AQ92625 1134 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 SEMA4DQ92854 862 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 RNFT2Q96EX2 444 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 TASP1Q9H6P5 420 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 CENPLQ8N0S6 344 aaPredicted RBP11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 C5orf22Q49AR2 442 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 OGFOD2Q6N063 350 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 NUP50Q9UKX7 468 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 GH1P01241 217 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 GARTP22102 1010 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 FNTAP49354 379 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 CCDC17Q96LX7 622 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 IP6K2Q9UHH9 426 aa11.33□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC26A3P40879 764 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 PGBD2Q6P3X8 592 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDKL3Q8IVW4 592 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 RHOT1Q8IXI2 618 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC9A8Q9Y2E8 581 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 NMT2O60551 498 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 STAT3P40763 770 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF512Q96ME7 567 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CYP51A1Q16850 503 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZFP1Q6P2D0 407 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CRTC3Q6UUV7 619 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SPATA2LQ8IUW3 424 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ERVK-11Q9UQG0 969 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 MED14O60244 1454 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 OOSP2Q86WS3 158 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 VPS4AQ9UN37 437 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 C12orf71A8MTZ7 269 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CYP26A1O43174 497 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SNX3O60493 162 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 GPC1P35052 558 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 APOPT1Q96IL0 206 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 KLHL3Q9UH77 587 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 OGDHLQ9ULD0 1010 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SAGE2PA6NJ88 616 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TOR1BO14657 336 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 GTF2H1P32780 548 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 PEX6Q13608 980 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 EPC2Q52LR7 807 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZBTB38Q8NAP3 1195 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 OSBP2Q969R2 916 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CYP4F2P78329 520 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 CYP4F3Q08477 520 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SMYD1Q8NB12 490 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZNF609O15014 1411 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 A0A087X0T9 212 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SRRM3A6NNA2 597 aaPredicted RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 DCXO43602 365 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms