RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 XRCC1P18887 633 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 SPP2Q13103 211 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CUL2Q13617 745 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 TAF5Q15542 800 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CYP2R1Q6VVX0 501 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 KYAT3Q6YP21 454 aaKnown RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CHSY1Q86X52 802 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CXorf38Q8TB03 319 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 BTBD9Q96Q07 612 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 SEPT10Q9P0V9 454 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 EFR3BQ9Y2G0 817 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CEPT1Q9Y6K0 416 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 HSPA4LO95757 839 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 AMHP03971 560 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CDH6P55285 790 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 GSTM4Q03013 218 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 FERMT1Q9BQL6 677 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 KLHL25Q9H0H3 589 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 ZDHHC7Q9NXF8 308 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 EPS15L1Q9UBC2 864 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CDC14AQ9UNH5 594 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 SH3PXD2BA1X283 911 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 DYTNA2CJ06 578 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 A8MU76 341 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 KRT38O76015 456 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 KRT3P12035 628 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CD1EP15812 388 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CDH3P22223 829 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CDH8P55286 799 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 BNIP3Q12983 259 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 CRY2Q49AN0 593 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 N4BP2L1Q5TBK1 243 aaPredicted RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
VAMP1-201ENST00000361716 LAYNQ6UX15 382 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
VAMP1-201ENST00000361716 PSMD12O00232 456 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 NOL3O60936 208 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 CBFA2T3O75081 653 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 COX4I1P13073 169 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 DPEP1P16444 411 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 WNT7BP56706 349 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 CRADDP78560 199 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 GNA12Q03113 381 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TRAF2Q12933 501 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 NEDD8Q15843 81 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 HADHQ16836 314 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TATDN1Q6P1N9 297 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 RELL1Q8IUW5 271 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TFB1MQ8WVM0 346 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 RMND5BQ96G75 393 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ZMAT2Q96NC0 199 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 CIB1Q99828 191 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 WDR83Q9BRX9 315 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 CROCCQ5TZA2 2017 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SF3B1O75533 1304 aaKnown RBP eCLIP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 KCNN4O15554 427 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 OXSR1O95747 527 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 PTPN1P18031 435 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 EEF1B2P24534 225 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ABCG1P45844 678 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 RGS7P49802 495 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 THOP1P52888 689 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 NUP107P57740 925 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ERI1Q8IV48 349 aaKnown RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 BBS5Q8N3I7 341 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 UBA3Q8TBC4 463 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ZNF516Q92618 1163 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 ZDHHC15Q96MV8 337 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 LENG8Q96PV6 779 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 SERPINI1Q99574 410 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 WDR55Q9H6Y2 383 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-201ENST00000361716 PPCSQ9HAB8 311 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TXNDC16Q9P2K2 825 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 FUOMA2VDF0 154 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 NPR1P16066 1061 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 NR4A1P22736 598 aa13.06□□□□□ -0.32
VAMP1-201ENST00000361716 TRIM16LQ309B1 348 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms