RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TC2NQ8N9U0 490 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 TSC22D3Q99576 134 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 NLNQ9BYT8 704 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 NDRG2Q9UN36 371 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 ANKRD63C9JTQ0 380 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 KCNK1O00180 336 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 RTN3O95197 1032 aaPredicted RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 HDCP19113 662 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 RAET1GQ6H3X3 334 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 EML1O00423 815 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 AGTP01019 485 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 MGAT1P26572 445 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 TARSP26639 723 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 FLT3LGP49771 235 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 PDK2Q15119 407 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 PREPLQ4J6C6 727 aaPredicted RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 ABCG8Q9H221 673 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 STOML1Q9UBI4 398 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZNF112Q9UJU3 913 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 SERPINA13PQ6UXR4 307 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 DNAJC1Q96KC8 554 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 HTATIP2Q9BUP3 242 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 GEMIN8Q9NWZ8 242 aaKnown RBP20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 IMPAD1Q9NX62 359 aa20.8■□□□□ 0.92
CDC42BPB-201ENST00000361246 E9PBE3 544 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 SLC26A4O43511 780 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 SKIV2L2P42285 1042 aaKnown RBP20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 EHD4Q9H223 541 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 MAN1A2O60476 641 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 CDH16O75309 829 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 SLITRK3O94933 977 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 TYMPP19971 482 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 DAGLBQ8NCG7 672 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 ULBP1Q9BZM6 244 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 DDX28Q9NUL7 540 aaKnown RBP20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 GTF3C4Q9UKN8 822 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 UMPSP11172 480 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 PLK1P53350 603 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 TRIP4Q15650 581 aaPredicted RBP20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 USP38Q8NB14 1042 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 CASP10Q92851 521 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 ERP44Q9BS26 406 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZMYND8Q9ULU4 1186 aaPredicted RBP20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 NFASCO94856 1347 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 SHROOM1Q2M3G4 852 aaPredicted RBP20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 ARHGAP17Q68EM7 881 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 NLGN2Q8NFZ4 835 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 APBA2Q99767 749 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 BAIAP3O94812 1187 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZSWIM1Q9BR11 485 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 PCDHB9Q9Y5E1 797 aa20.79■□□□□ 0.92
CDC42BPB-201ENST00000361246 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 CYP2A7P20853 494 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 MDH1P40925 334 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 SH3BGRP55822 239 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 MRPL28Q13084 256 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 KCTD19Q17RG1 926 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 EXOC2Q96KP1 924 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 UBE2OQ9C0C9 1292 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 NR6A1Q15406 480 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 BBS4Q96RK4 519 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 CNPY3Q9BT09 278 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 FAM198AQ9UFP1 575 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 ARL2BPQ9Y2Y0 163 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 KLHL41O60662 606 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 SERPINF2P08697 491 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 ABCG1P45844 678 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 NFYCQ13952 458 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 PARP9Q8IXQ6 854 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 C2orf73Q8N5S3 287 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 OR6K2Q8NGY2 324 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 USP7Q93009 1102 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 MARCH2Q9P0N8 246 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 ATP5BP06576 529 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 PRKAG1P54619 331 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 EARS2Q5JPH6 523 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 RNF44Q7L0R7 432 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 NECAB2Q7Z6G3 386 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZNF473Q8WTR7 871 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 ILKAPQ9H0C8 392 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 CDH2P19022 906 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 CATSPERGQ6ZRH7 1159 aa20.78■□□□□ 0.92
CDC42BPB-201ENST00000361246 TRBV23OR9-2A0A075B6M9 112 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 UBA1P22314 1058 aaKnown RBP20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 OTOP1Q7RTM1 612 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ZIM3Q96PE6 472 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 LRRC40Q9H9A6 602 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 WDR41Q9HAD4 459 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 NOMO2Q5JPE7 1267 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 TAF2Q6P1X5 1199 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 P3H2Q8IVL5 708 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ARNTL2Q8WYA1 636 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ANKS1AQ92625 1134 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 KLHL3Q9UH77 587 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 CTPS1P17812 591 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ATP6V1B2P21281 511 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 NOS3P29474 1203 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms