RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 RAB34Q9BZG1 259 aa8.01□□□□□ -1.13
CCL28-201ENST00000361115 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
CCL28-201ENST00000361115 VRTNQ9H8Y1 702 aa8.01□□□□□ -1.13
CCL28-201ENST00000361115 SAR1AQ9NR31 198 aa8.01□□□□□ -1.13
CCL28-201ENST00000361115 DCTN4Q9UJW0 460 aa8.01□□□□□ -1.13
CCL28-201ENST00000361115 CFAP69A5D8W1 941 aa8□□□□□ -1.13
CCL28-201ENST00000361115 MIF4GDA9UHW6 222 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 TMEM189-UBE2V1I3L0A0 370 aa8□□□□□ -1.13
CCL28-201ENST00000361115 C2CD2LO14523 706 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GCAP28676 217 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GRIA2P42262 883 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CCR3P51677 355 aa8□□□□□ -1.13
CCL28-201ENST00000361115 OVGP1Q12889 678 aa8□□□□□ -1.13
CCL28-201ENST00000361115 PDK4Q16654 411 aa8□□□□□ -1.13
CCL28-201ENST00000361115 IZUMO2Q6UXV1 221 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TMCO2Q7Z6W1 182 aaPredicted RBP8□□□□□ -1.13
CCL28-201ENST00000361115 TRABD2AQ86V40 505 aa8□□□□□ -1.13
CCL28-201ENST00000361115 C4orf33Q8N1A6 199 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CFAP61Q8NHU2 1237 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CYP2W1Q8TAV3 490 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ATG4AQ8WYN0 398 aa8□□□□□ -1.13
CCL28-201ENST00000361115 OBP2AQ9NY56 170 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GDE1Q9NZC3 331 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TRAF3IP3Q9Y228 551 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TBC1D30Q9Y2I9 924 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GIT1Q9Y2X7 761 aa8□□□□□ -1.13
CCL28-201ENST00000361115 SIT1Q9Y3P8 196 aa8□□□□□ -1.13
CCL28-201ENST00000361115 COMMD3-BMI1R4GMX3 469 aa8□□□□□ -1.13
CCL28-201ENST00000361115 DOCK5Q9H7D0 1870 aa8□□□□□ -1.13
CCL28-201ENST00000361115 WDR81Q562E7 1941 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CLDN3O15551 220 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CCDC22O60826 627 aa8□□□□□ -1.13
CCL28-201ENST00000361115 KRT18P05783 430 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 PHKA2P46019 1235 aa8□□□□□ -1.13
CCL28-201ENST00000361115 HTR4Q13639 388 aa8□□□□□ -1.13
CCL28-201ENST00000361115 SPARCL1Q14515 664 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ARHGAP44Q17R89 818 aa8□□□□□ -1.13
CCL28-201ENST00000361115 KNOP1Q1ED39 458 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 VARS2Q5ST30 1063 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 C11orf63Q6NUN7 778 aa8□□□□□ -1.13
CCL28-201ENST00000361115 DCLRE1AQ6PJP8 1040 aa8□□□□□ -1.13
CCL28-201ENST00000361115 RGS9BPQ6ZS82 235 aa8□□□□□ -1.13
CCL28-201ENST00000361115 NAT14Q8WUY8 206 aa8□□□□□ -1.13
CCL28-201ENST00000361115 DEPDC1BQ8WUY9 529 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CRYGNQ8WXF5 182 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CD101Q93033 1021 aa8□□□□□ -1.13
CCL28-201ENST00000361115 STMN2Q93045 179 aa8□□□□□ -1.13
CCL28-201ENST00000361115 HIC2Q96JB3 615 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TBC1D17Q9HA65 648 aa8□□□□□ -1.13
CCL28-201ENST00000361115 KCNH7Q9NS40 1196 aa8□□□□□ -1.13
CCL28-201ENST00000361115 CHST7Q9NS84 486 aa8□□□□□ -1.13
CCL28-201ENST00000361115 NCDNQ9UBB6 729 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ZNF212Q9UDV6 495 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ACTL7BQ9Y614 415 aa8□□□□□ -1.13
CCL28-201ENST00000361115 KANSL1LA0AUZ9 987 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GYG2O15488 501 aa8□□□□□ -1.13
CCL28-201ENST00000361115 LAMTOR5O43504 91 aa8□□□□□ -1.13
CCL28-201ENST00000361115 OR6B1O95007 311 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GLUD1P00367 558 aa8□□□□□ -1.13
CCL28-201ENST00000361115 FTLP02792 175 aaPredicted RBP8□□□□□ -1.13
CCL28-201ENST00000361115 NR3C1P04150 777 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ASLP04424 464 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ITGB5P18084 799 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ITIH2P19823 946 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GLUD2P49448 558 aa8□□□□□ -1.13
CCL28-201ENST00000361115 ORC2Q13416 577 aaPredicted RBP8□□□□□ -1.13
CCL28-201ENST00000361115 MAPK6Q16659 721 aa8□□□□□ -1.13
CCL28-201ENST00000361115 XKR3Q5GH77 459 aa8□□□□□ -1.13
CCL28-201ENST00000361115 MARK2Q7KZI7 788 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 SFR1Q86XK3 245 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TRIM42Q8IWZ5 723 aa8□□□□□ -1.13
CCL28-201ENST00000361115 RIBC1Q8N443 379 aaPredicted RBP8□□□□□ -1.13
CCL28-201ENST00000361115 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
CCL28-201ENST00000361115 SNF8Q96H20 258 aa8□□□□□ -1.13
CCL28-201ENST00000361115 DNAJC1Q96KC8 554 aaKnown RBP8□□□□□ -1.13
CCL28-201ENST00000361115 CENPKQ9BS16 269 aa8□□□□□ -1.13
CCL28-201ENST00000361115 STK33Q9BYT3 514 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TRABDQ9H4I3 376 aa8□□□□□ -1.13
CCL28-201ENST00000361115 LRRC19Q9H756 370 aa8□□□□□ -1.13
CCL28-201ENST00000361115 TAS2R1Q9NYW7 299 aa8□□□□□ -1.13
CCL28-201ENST00000361115 GABBR1Q9UBS5 961 aa8□□□□□ -1.13
CCL28-201ENST00000361115 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8□□□□□ -1.13
CCL28-201ENST00000361115 H0Y858 1186 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 LRRN2O75325 713 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 USP1O94782 785 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 ITGA2BP08514 1039 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 GPC3P51654 580 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 MLF2Q15773 248 aaPredicted RBP7.99□□□□□ -1.13
CCL28-201ENST00000361115 CSRP2Q16527 193 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 DBN1Q16643 649 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 UBE2SQ16763 222 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 DGKKQ5KSL6 1271 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 SPDYAQ5MJ70 313 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 SPATA24Q86W54 205 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 ZNF75CPQ92670 426 aaPredicted RBP7.99□□□□□ -1.13
CCL28-201ENST00000361115 MCUR1Q96AQ8 359 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 NMD3Q96D46 503 aaKnown RBP7.99□□□□□ -1.13
CCL28-201ENST00000361115 ECSITQ9BQ95 431 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 HERPUD2Q9BSE4 406 aa7.99□□□□□ -1.13
CCL28-201ENST00000361115 ANO3Q9BYT9 981 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms