RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 PLD4Q96BZ4 506 aa18.18■□□□□ 0.5
COL9A1-203ENST00000360859 NUP58Q9BVL2 599 aa18.18■□□□□ 0.5
COL9A1-203ENST00000360859 ULBP1Q9BZM6 244 aa18.18■□□□□ 0.5
COL9A1-203ENST00000360859 DMXL2Q8TDJ6 3036 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 TULP2O00295 520 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
COL9A1-203ENST00000360859 TIMM44O43615 452 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 CAPNS1P04632 268 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 EPHX1P07099 455 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 SERPINA13PQ6UXR4 307 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 CACUL1Q86Y37 369 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 ADAMTS14Q8WXS8 1223 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 IL21RQ9HBE5 538 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
COL9A1-203ENST00000360859 TAF4O00268 1085 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 STX10O60499 249 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 CBFA2T3O75081 653 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 FTH1P19P0C7X4 201 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 ACADMP11310 421 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 HOXD9P28356 352 aaPredicted RBP18.16■□□□□ 0.5
COL9A1-203ENST00000360859 BNC1Q01954 994 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 ARID5AQ03989 594 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 RING1Q06587 406 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 PDE4CQ08493 712 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 GOLGA7BQ2TAP0 167 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 MPPE1Q53F39 396 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 FMNL3Q8IVF7 1028 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 SMYD4Q8IYR2 804 aaPredicted RBP18.16■□□□□ 0.5
COL9A1-203ENST00000360859 PNPLA1Q8N8W4 532 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 GOLPH3LQ9H4A5 285 aa18.16■□□□□ 0.5
COL9A1-203ENST00000360859 EIF2B4Q9UI10 523 aaKnown RBP18.16■□□□□ 0.5
COL9A1-203ENST00000360859 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 TSPAN3O60637 253 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 EPB41P11171 864 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 HLA-EP13747 358 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 HOXB3P14651 431 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 HLA-FP30511 346 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 HARS2P49590 506 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 BCAT1P54687 386 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 CAMK2GQ13555 558 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 CBWD6Q4V339 395 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 CBWD3Q5JTY5 395 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 CBWD5Q5RIA9 395 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 GLRX5Q86SX6 157 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 FAM124AQ86V42 546 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 OR2T3Q8NH03 318 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 C1orf216Q8TAB5 229 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 SETD7Q8WTS6 366 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 GAREM1Q9H706 876 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 LRRC4Q9HBW1 653 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 OLA1Q9NTK5 396 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 SFMBT1Q9UHJ3 866 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 TSPAN16Q9UKR8 245 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 HBS1LQ9Y450 684 aaKnown RBP18.15■□□□□ 0.5
COL9A1-203ENST00000360859 PKD1L2Q7Z442 2459 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 CKAP5Q14008 2032 aa18.15■□□□□ 0.5
COL9A1-203ENST00000360859 A0A1W2PQ27 194 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 A0A1W2PQ64 194 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 CETN3O15182 167 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 ZNF202O95125 648 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 ZNF883P0CG24 379 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 MATKP42679 507 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 ADIGQ0VDE8 80 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 BST2Q10589 180 aaKnown RBP18.14■□□□□ 0.49
COL9A1-203ENST00000360859 SCAPQ12770 1279 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 BSPRYQ5W0U4 402 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 SLCO6A1Q86UG4 719 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 PROSER1Q86XN7 944 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 RNF139Q8WU17 664 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 EDEM1Q92611 657 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 IPO9Q96P70 1041 aaKnown RBP18.14■□□□□ 0.49
COL9A1-203ENST00000360859 PCED1AQ9H1Q7 454 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 TMEM245Q9H330 911 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 STOML2Q9UJZ1 356 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 LHX6Q9UPM6 363 aa18.14■□□□□ 0.49
COL9A1-203ENST00000360859 APOBEC2Q9Y235 224 aaKnown RBP18.14■□□□□ 0.49
COL9A1-203ENST00000360859 FNDC3AQ9Y2H6 1198 aaKnown RBP18.14■□□□□ 0.49
COL9A1-203ENST00000360859 YJEFN3A6XGL0 299 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 E7ENQ6 273 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 CER1O95813 267 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 CUL2Q13617 745 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 HLA-BQ31612 363 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 FNDC3BQ53EP0 1204 aaKnown RBP18.13■□□□□ 0.49
COL9A1-203ENST00000360859 SGO2Q562F6 1265 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 DCAF17Q5H9S7 520 aaPredicted RBP18.13■□□□□ 0.49
COL9A1-203ENST00000360859 ADGRF1Q5T601 910 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 TCERG1LQ5VWI1 586 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 IL27RAQ6UWB1 636 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 CCNI2Q6ZMN8 369 aaPredicted RBP18.13■□□□□ 0.49
COL9A1-203ENST00000360859 ADIPOR2Q86V24 386 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 ZNF366Q8N895 744 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 UBA3Q8TBC4 463 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 WFIKKN2Q8TEU8 576 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 CYB5D2Q8WUJ1 264 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 TMA16Q96EY4 203 aaKnown RBP18.13■□□□□ 0.49
COL9A1-203ENST00000360859 C6orf106Q9H6K1 298 aaPredicted RBP18.13■□□□□ 0.49
COL9A1-203ENST00000360859 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
COL9A1-203ENST00000360859 HESX1Q9UBX0 185 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms