RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 FTSJ1Q9UET6 329 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 RASAL2Q9UJF2 1139 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.09
VPS29-201ENST00000360579 PVALEFA0A1B0GWK0 134 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 FAM149AA5PLN7 773 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 PAPSS1O43252 624 aaPredicted RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 SEMA4FO95754 770 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 ASS1P00966 412 aaKnown RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 SYT1P21579 422 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 CD27P26842 260 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 HNF1BP35680 557 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 ASPAP45381 313 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 BCAT1P54687 386 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 PDE4CQ08493 712 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 INCA1Q0VD86 236 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 EFEMP1Q12805 493 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 CAMK2GQ13555 558 aaPredicted RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 CUL4AQ13619 759 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 CCDC157Q569K6 752 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 C6orf118Q5T5N4 469 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 ADAT2Q7Z6V5 191 aaKnown RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 SCD5Q86SK9 330 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 MARCH9Q86YJ5 346 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 ARHGAP18Q8N392 663 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 RBBP8NLQ8NC74 664 aaPredicted RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 LSM14AQ8ND56 463 aaKnown RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 TMEM174Q8WUU8 243 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 IMPG2Q9BZV3 1241 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 BTBD1Q9H0C5 482 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 AGO1Q9UL18 857 aaKnown RBP14.51□□□□□ -0.09
VPS29-201ENST00000360579 PLA2G4CQ9UP65 541 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 PCDHGA1Q9Y5H4 931 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 USP3Q9Y6I4 520 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 ASXL3Q9C0F0 2248 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 BPTFQ12830 3046 aa14.51□□□□□ -0.09
VPS29-201ENST00000360579 IKBKBO14920 756 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 PPP6R2O75170 966 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 HMBSP08397 361 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 ACSL1P33121 698 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 ZNF445P59923 1031 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 TTC31Q49AM3 519 aaPredicted RBP14.5□□□□□ -0.09
VPS29-201ENST00000360579 DHRS13Q6UX07 377 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 LRRC69Q6ZNQ3 347 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 RSRC2Q7L4I2 434 aaKnown RBP14.5□□□□□ -0.09
VPS29-201ENST00000360579 DENND1CQ8IV53 801 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 SLC9A9Q8IVB4 645 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 LINC00301Q8NCQ3 95 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 PIP4K2CQ8TBX8 421 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 WFIKKN2Q8TEU8 576 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 SORCS1Q8WY21 1168 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 GOLGA1Q92805 767 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 SKA1Q96BD8 255 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 ELMO3Q96BJ8 720 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 DUSP16Q9BY84 665 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 SGK2Q9HBY8 427 aa14.5□□□□□ -0.09
VPS29-201ENST00000360579 GOLGA4Q13439 2230 aaKnown RBP14.49□□□□□ -0.09
VPS29-201ENST00000360579 H0Y8X5 98 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 ATXN7O15265 892 aaPredicted RBP14.49□□□□□ -0.09
VPS29-201ENST00000360579 SPTLC2O15270 562 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 RRP8O43159 456 aaKnown RBP14.49□□□□□ -0.09
VPS29-201ENST00000360579 TSPAN3O60637 253 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 DNTTP04053 509 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 C1SP09871 688 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 PIK3CAP42336 1068 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 CTSKP43235 329 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 C21orf59P57076 290 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 FNDC3BQ53EP0 1204 aaKnown RBP14.49□□□□□ -0.09
VPS29-201ENST00000360579 MPPE1Q53F39 396 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 TMEM215Q68D42 235 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 SV2AQ7L0J3 742 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 FAM217AQ8IXS0 508 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 TMC2Q8TDI7 906 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 PLD4Q96BZ4 506 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 BIRC7Q96CA5 298 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 CRELD1Q96HD1 420 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 TWNKQ96RR1 684 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 ACE2Q9BYF1 805 aaPredicted RBP14.49□□□□□ -0.09
VPS29-201ENST00000360579 BACH2Q9BYV9 841 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 TMEM245Q9H330 911 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 DMAC2Q9NW81 257 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 MARCH2Q9P0N8 246 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 CLEC4EQ9ULY5 219 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 SLCO1B1Q9Y6L6 691 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 CABIN1Q9Y6J0 2220 aa14.49□□□□□ -0.09
VPS29-201ENST00000360579 PLK4O00444 970 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 FSBPO95073 299 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 KIF20AO95235 890 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 JUPP14923 745 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 HARS2P49590 506 aaKnown RBP14.48□□□□□ -0.09
VPS29-201ENST00000360579 RACK1P63244 317 aaKnown RBP14.48□□□□□ -0.09
VPS29-201ENST00000360579 SFSWAPQ12872 951 aaKnown RBP14.48□□□□□ -0.09
VPS29-201ENST00000360579 SPOPLQ6IQ16 392 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 KNL1Q8NG31 2342 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 CKAP5Q14008 2032 aa14.48□□□□□ -0.09
VPS29-201ENST00000360579 A0A1B0GTQ1 180 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 KCNK3O14649 394 aa14.47□□□□□ -0.09
VPS29-201ENST00000360579 VILLO15195 856 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms