RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PLA2G6O60733 806 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 BST2Q10589 180 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 TRMT5Q32P41 509 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 LRRC49Q8IUZ0 686 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 OR56A4Q8NGH8 313 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 TMEM159Q96B96 161 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 KIFC1Q9BW19 673 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PIGUQ9H490 435 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ADARB2Q9NS39 739 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 TAS2R13Q9NYV9 303 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 RABGEF1Q9UJ41 708 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 RUVBL2Q9Y230 463 aaKnown RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 CASZ1Q86V15 1759 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 RFX3P48380 749 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 FAM228AQ86W67 206 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ARID3BQ8IVW6 561 aaPredicted RBP9.92□□□□□ -0.82
CUX1-203ENST00000360264 ZNF614Q8N883 585 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 GPRC5DQ9NZD1 345 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 ALG6Q9Y672 507 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PRR36Q9H6K5 1346 aa9.92□□□□□ -0.82
CUX1-203ENST00000360264 PI4K2AQ9BTU6 479 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 CLPTM1O96005 669 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 PDZK1Q5T2W1 519 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 KIF20BQ96Q89 1820 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 INSCQ1MX18 579 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 PRKAG3Q9UGI9 489 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ENTPD4Q9Y227 616 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 SIK3Q9Y2K2 1263 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MYH13Q9UKX3 1938 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 IL17RAQ96F46 866 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ACTR8Q9H981 624 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 EFCAB1Q9HAE3 211 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ARID5BQ14865 1188 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 Q4G0T1 1027 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 INTS11Q5TA45 600 aaKnown RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 PAGE2Q7Z2X7 111 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 TPCN2Q8NHX9 752 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ZFP28Q8NHY6 868 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 HIC2Q96JB3 615 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 HPS4Q9NQG7 708 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 STARD7Q9NQZ5 370 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 INTS13Q9NVM9 706 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ANAPC2Q9UJX6 822 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ZNF862O60290 1169 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 BHMTQ93088 406 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 GJB4Q9NTQ9 266 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MROH7Q68CQ1 1323 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 LRRC14BA6NHZ5 514 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 CCNG2Q16589 344 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 VAT1Q99536 393 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 PCDHB5Q9Y5E4 795 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 NCF1BA6NI72 391 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 NCF1CA8MVU1 366 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 IGSF6O95976 241 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 NCF1P14598 390 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 CD151P48509 253 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 TMEM62Q0P6H9 643 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MAPK7Q13164 816 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 NDUFAF6Q330K2 333 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 KYAT3Q6YP21 454 aaKnown RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 ZNF655Q8N720 491 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 SCAIQ8N9R8 606 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 USP31Q70CQ4 1352 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 RAD51CO43502 376 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 LYPLAL1Q5VWZ2 237 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 PCNX4Q63HM2 1172 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 SCARA3Q6AZY7 606 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 EPHX4Q8IUS5 362 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ZCWPW1Q9H0M4 648 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 RAB23Q9ULC3 237 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 PNMA8BQ9ULN7 279 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 COQ6Q9Y2Z9 468 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 RECQL5O94762 991 aaPredicted RBP9.91□□□□□ -0.82
CUX1-203ENST00000360264 PSEN1P49768 467 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MPZL3Q6UWV2 235 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 IZUMO1Q8IYV9 350 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 FNDC5Q8NAU1 212 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 MED14O60244 1454 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 UMPSP11172 480 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 CSHL1Q14406 222 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 KLHL12Q53G59 568 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ARMC3Q5W041 872 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 OLFML2BQ68BL8 750 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 ATG9AQ7Z3C6 839 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
CUX1-203ENST00000360264 HIST1H2ABP04908 130 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 FBXO47Q5MNV8 452 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 HIST3H2AQ7L7L0 130 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 SLC13A5Q86YT5 568 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 CBWD2Q8IUF1 395 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 HIST1H2ACQ93077 130 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 SNX6Q9UNH7 406 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms