RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 BCL7CQ8WUZ0 217 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RSAD2Q8WXG1 361 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 LRRC45Q96CN5 670 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DTNBP1Q96EV8 351 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 FAM193BQ96PV7 902 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RNF157Q96PX1 679 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SH3GL2Q99962 352 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TSEN34Q9BSV6 310 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 C11orf84Q9BUA3 381 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 BEGAINQ9BUH8 593 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 IRF2BPLQ9H1B7 796 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CDC42EP4Q9H3Q1 356 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 HIPK3Q9H422 1215 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PIH1D1Q9NWS0 290 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MTMR10Q9NXD2 777 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PCDHB7Q9Y5E2 793 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DNM1LO00429 736 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 OPA1O60313 960 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 AVILO75366 819 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TADA2AO75478 443 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ZBED1O96006 694 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RBL1P28749 1068 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PCSK1P29120 753 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RPL22P35268 128 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SLC11A1P49279 550 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CTCFP49711 727 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DAOAP59103 153 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 COPS2P61201 443 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 IFI35P80217 286 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 BASP1P80723 227 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SUZ12Q15022 739 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TAZQ16635 292 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PREPLQ4J6C6 727 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MSS51Q4VC12 460 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ERMARDQ5T6L9 678 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DENND2CQ68D51 928 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 RHBDF2Q6PJF5 856 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PRSS55Q6UWB4 352 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 BHLHA9Q7RTU4 235 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 ABI1Q8IZP0 508 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TMEM86AQ8N2M4 240 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CCDC89Q8N998 374 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CCDC110Q8TBZ0 833 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 GRK7Q8WTQ7 553 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 STK32AQ8WU08 396 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DEPDC1BQ8WUY9 529 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MAIP1Q8WWC4 291 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 P3H4Q92791 437 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 N4BP2L2Q92802 583 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SLCO2A1Q92959 643 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SMARCD1Q96GM5 515 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 HSFY1Q96LI6 401 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TRIM56Q9BRZ2 755 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TRAIPQ9BWF2 469 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 NRDE2Q9H7Z3 1164 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SAYSD1Q9NPB0 183 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PAK6Q9NQU5 681 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 DDIT4Q9NX09 232 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MTRF1LQ9UGC7 380 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 TBK1Q9UHD2 729 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SFMBT1Q9UHJ3 866 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 CDH9Q9ULB4 789 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 NOVA2Q9UNW9 492 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 SPTBN5Q9NRC6 3674 aaKnown RBP5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PTPRDP23468 1912 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 PRUNE2Q8WUY3 3088 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 NLRC5Q86WI3 1866 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 MYO9BQ13459 2157 aa5.27□□□□□ -1.57
ATXN3-202ENST00000359366 APOC4-APOC2K7ER74 178 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 M0QZQ0 153 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 APOL1O14791 398 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 MCF2LO15068 1137 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 MDM4O15151 490 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 KCNN4O15554 427 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 RIPK2O43353 540 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 GNRH1P01148 92 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 APOC2P02655 101 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 MYZAPP0CAP1 466 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 CREB1P16220 341 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 ITGB8P26012 769 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 TPP2P29144 1249 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-202ENST00000359366 HNRNPH1P31943 449 aaKnown RBP5.26□□□□□ -1.57
ATXN3-202ENST00000359366 ACADSBP45954 432 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 RPL34P49207 117 aaKnown RBP5.26□□□□□ -1.57
ATXN3-202ENST00000359366 DRG2P55039 364 aaKnown RBP5.26□□□□□ -1.57
ATXN3-202ENST00000359366 USP46P62068 366 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 ROR1Q01973 937 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 GUCY1A3Q02108 690 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 DSC1Q08554 894 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 FAAP100Q0VG06 881 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 MTMR3Q13615 1198 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 SLC25A52Q3SY17 297 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 PLEKHG4Q58EX7 1191 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 EFHC1Q5JVL4 640 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 RTP2Q5QGT7 225 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 FNBP1LQ5T0N5 605 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 DCLRE1AQ6PJP8 1040 aa5.26□□□□□ -1.57
ATXN3-202ENST00000359366 SPATA2LQ8IUW3 424 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms