RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 POMCP01189 267 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 CXCL8P10145 99 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 PLA2G4CQ9UP65 541 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 GARTP22102 1010 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF544Q6NX49 715 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 MAP10Q9P2G4 905 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 CCDC154A6NI56 674 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 EZH2Q15910 746 aaKnown RBP18.82■□□□□ 0.6
SHANK1-202ENST00000359082 USP7Q93009 1102 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 EPS8L2Q9H6S3 715 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 DAPK2Q9UIK4 370 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 FAM98BQ52LJ0 330 aaKnown RBP18.82■□□□□ 0.6
SHANK1-202ENST00000359082 FAM45BPQ6NSW5 357 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 WDR41Q9HAD4 459 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 POLG2Q9UHN1 485 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 CLPTM1O96005 669 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 FCGR1AP12314 374 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 RARGP13631 454 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF57Q68EA5 555 aaPredicted RBP18.82■□□□□ 0.6
SHANK1-202ENST00000359082 ACTRT1Q8TDG2 376 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 AGO4Q9HCK5 861 aaKnown RBP18.82■□□□□ 0.6
SHANK1-202ENST00000359082 PCDHGA4Q9Y5G9 962 aa18.82■□□□□ 0.6
SHANK1-202ENST00000359082 A0A087WZ62 844 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 DCDC2CA8MYV0 355 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 CNPP09543 421 aaKnown RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 TAL1P17542 331 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 GRTP1Q5TC63 336 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 CASP12Q6UXS9 341 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF571Q7Z3V5 609 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 FDXACB1Q9BRP7 624 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF518BQ9C0D4 1074 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 REXO4Q9GZR2 422 aaKnown RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 F8VZ95 297 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 PPP2R1BP30154 601 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 CAP2P40123 477 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 FNDC5Q8NAU1 212 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ARMC7Q9H6L4 198 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 O00370 1275 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 RPS12P25398 132 aaKnown RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 LAMTOR4Q0VGL1 99 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ACOX1Q15067 660 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 EXD1Q8NHP7 514 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 RBM22Q9NW64 420 aaKnown RBP eCLIP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ABCA6Q8N139 1617 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 PROSCO94903 275 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 PCNX4Q63HM2 1172 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 IFNLR1Q8IU57 520 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 NUDT14O95848 222 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 TRIM32Q13049 653 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 PDZK1Q5T2W1 519 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 TRIQKQ629K1 86 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 DOK6Q6PKX4 331 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 POMGNT2Q8NAT1 580 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 TAS1R2Q8TE23 839 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ZBTB10Q96DT7 871 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 KLHL31Q9H511 634 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 A8MX80 341 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 HS6ST1O60243 411 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 MGAT1P26572 445 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ATP1A4Q13733 1029 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 BOP1Q14137 746 aaKnown RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 OTUD3Q5T2D3 398 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF280DQ6N043 979 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 EID3Q8N140 333 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 GDPD5Q8WTR4 605 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 OSMRQ99650 979 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 ADI1Q9BV57 179 aa18.81■□□□□ 0.6
SHANK1-202ENST00000359082 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 HOXA2O43364 376 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 ENO2P09104 434 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-202ENST00000359082 Q4G0T1 1027 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 KCNMB4Q86W47 210 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 FAM45AQ8TCE6 357 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 HNRNPLLQ8WVV9 542 aaKnown RBP18.8■□□□□ 0.6
SHANK1-202ENST00000359082 RIBC2Q9H4K1 309 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 MID1IP1Q9NPA3 183 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 SEC22BO75396 215 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 MICAL2O94851 1124 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 FGD3Q5JSP0 725 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 TBKBP1A7MCY6 615 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 ATP6V1G2O95670 118 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 MGAT5Q09328 741 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 LY6KQ17RY6 165 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 ZNF618Q5T7W0 954 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 NYAP1Q6ZVC0 841 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 CACTIN-AS1Q8N1I8 211 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 KLHL28Q9NXS3 571 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 NDOR1Q9UHB4 597 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 ABCA9Q8IUA7 1624 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 AKAP5P24588 427 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 PTPN4P29074 926 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 NT5DC4Q86YG4 428 aa18.8■□□□□ 0.6
SHANK1-202ENST00000359082 TMEM114B3SHH9 223 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms