RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TFEBP19484 476 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SLC12A1Q13621 1099 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 OTOP1Q7RTM1 612 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ADCK1Q86TW2 530 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM79Q9BSE2 394 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 C20orf96Q9NUD7 363 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ACOT9Q9Y305 439 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RAP2CQ9Y3L5 183 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CCDC154A6NI56 674 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LIASO43766 372 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 AP1G2O75843 785 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TKTL1P51854 596 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CDC16Q13042 620 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MAD2L1Q13257 205 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF211Q13398 564 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HACD2Q6Y1H2 254 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MICU2Q8IYU8 434 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 WRNIP1Q96S55 665 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CST8O60676 142 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CYP2C18P33260 490 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PIK3CGP48736 1102 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 LMBRD2Q68DH5 695 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CCDC103Q8IW40 242 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SLC5A5Q92911 643 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TMEM120AQ9BXJ8 343 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MKLN1Q9UL63 735 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PCDHA11Q9Y5I1 949 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HSPE1-MOB4S4R3N1 261 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 BCLAF3A2AJT9 711 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GUCY1B2O75343 617 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HIRAP54198 1017 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 IL17AQ16552 155 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SPATA19Q7Z5L4 167 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DEFB107AQ8IZN7 70 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DNAJC18Q9H819 358 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DNAAF2Q9NVR5 837 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 IFT172Q9UG01 1749 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF263O14978 683 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MOGSQ13724 837 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DCAF15Q66K64 600 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NIPAL1Q6NVV3 410 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 KIAA0408Q6ZU52 694 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 C8orf59Q8N0T1 100 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CDRT15Q96T59 188 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SEPT10Q9P0V9 454 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 USP18Q9UMW8 372 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RPTORQ8N122 1335 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 FAM172BPA6NC97 362 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PABPC1P11940 636 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 AIF1P55008 147 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SV2AQ7L0J3 742 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 CYGBQ8WWM9 190 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 NMD3Q96D46 503 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 Q96MT0 163 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DDX50Q9BQ39 737 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GPATCH1Q9BRR8 931 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MTMR12Q9C0I1 747 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 A3GALT2U3KPV4 340 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 TESPA1A2RU30 521 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF45Q02386 682 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF618Q5T7W0 954 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ERAP2Q6P179 960 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RMI1Q9H9A7 625 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 AS3MTQ9HBK9 375 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 AP4B1Q9Y6B7 739 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 OAS1P00973 400 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 MYCP01106 439 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SHBGP04278 402 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DLDP09622 509 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PIM1P11309 404 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DEPDC1Q5TB30 811 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 BICRALQ6AI39 1079 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ECHDC2Q86YB7 292 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 HSFY1Q96LI6 401 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PIK3C2BO00750 1634 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 RIMBP2O15034 1052 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 DDX3YO15523 660 aaKnown RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 KCNN4O15554 427 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ENTPD5O75356 428 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SMIM11AP58511 58 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 GALNT1Q10472 559 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 C9orf72Q96LT7 481 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 SLC38A7Q9NVC3 462 aa4.22□□□□□ -1.73
SYNE2-204ENST00000358025 ATF5Q9Y2D1 282 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-204ENST00000358025 PRMT5O14744 637 aaPredicted RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 GJC1P36383 396 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 TRUB1Q8WWH5 349 aaKnown RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 ZDHHC15Q96MV8 337 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 HTATIP2Q9BUP3 242 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 BLOC1S4Q9NUP1 217 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 POMPQ9Y244 141 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 MYH14Q7Z406 1995 aaKnown RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 IRGMA1A4Y4 181 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 MPZL2O60487 215 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 GCLMP48507 274 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 CEBPAP49715 358 aaPredicted RBP4.21□□□□□ -1.73
SYNE2-204ENST00000358025 EID3Q8N140 333 aa4.21□□□□□ -1.73
SYNE2-204ENST00000358025 FAM71DQ8N9W8 422 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms