RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TANGO2Q6ICL3 276 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 SND1Q7KZF4 910 aaKnown RBP eCLIP26.35■■□□□ 1.81
SSBP3-202ENST00000357475 DENND1CQ8IV53 801 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 KRT35Q92764 455 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 CD101Q93033 1021 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 PLD4Q96BZ4 506 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 KLHL11Q9NVR0 708 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 LCMT1Q9UIC8 334 aa26.35■■□□□ 1.81
SSBP3-202ENST00000357475 C2CD4DB7Z1M9 353 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 SLC1A1P43005 524 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 KPNA1P52294 538 aaPredicted RBP26.34■■□□□ 1.81
SSBP3-202ENST00000357475 USP4Q13107 963 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 PARM1Q6UWI2 310 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 SLC35F6Q8N357 371 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 FGF14Q92915 247 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 SNRNP25Q9BV90 132 aaKnown RBP26.34■■□□□ 1.81
SSBP3-202ENST00000357475 PLA2G2FQ9BZM2 168 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.34■■□□□ 1.813e-6■■■□□ 18.1
SSBP3-202ENST00000357475 GOLGA6L7A0A1B0GV03 622 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 PRPSAP2O60256 369 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 DESP17661 470 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 ADRA1BP35368 520 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 BRMS1LQ5PSV4 323 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 NADSYN1Q6IA69 706 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 ZSCAN30Q86W11 494 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 PYROXD2Q8N2H3 581 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 RPP25Q9BUL9 199 aaKnown RBP26.34■■□□□ 1.81
SSBP3-202ENST00000357475 TRPV4Q9HBA0 871 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 AGO1Q9UL18 857 aaKnown RBP26.34■■□□□ 1.81
SSBP3-202ENST00000357475 FZD10Q9ULW2 581 aa26.34■■□□□ 1.81
SSBP3-202ENST00000357475 KIF26AQ9ULI4 1882 aaPredicted RBP26.33■■□□□ 1.81
SSBP3-202ENST00000357475 PAGE1O75459 146 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 RARAP10276 462 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 PIK3R6Q5UE93 754 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 NUGGCQ68CJ6 796 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 Q6ZNB5 142 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 OTOP3Q7RTS5 596 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 PEX26Q7Z412 305 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 BBS7Q8IWZ6 715 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 HSPH1Q92598 858 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 RPGRIP1Q96KN7 1286 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 ALS2CR12Q96Q35 445 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 KXD1Q9BQD3 176 aa26.33■■□□□ 1.81
SSBP3-202ENST00000357475 HEPACAM2A8MVW5 462 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 FANCGO15287 622 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 KIF5CO60282 957 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 APOEP02649 317 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 HARS2P49590 506 aaKnown RBP26.32■■□□□ 1.8
SSBP3-202ENST00000357475 SYCE1Q8N0S2 351 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 CELF5Q8N6W0 485 aaKnown RBP26.32■■□□□ 1.8
SSBP3-202ENST00000357475 TRIM58Q8NG06 486 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 NTAN1Q96AB6 310 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 MYEOVQ96EZ4 313 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 WDR24Q96S15 920 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 PHF7Q9BWX1 381 aaPredicted RBP26.32■■□□□ 1.8
SSBP3-202ENST00000357475 EPS15L1Q9UBC2 864 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 SH3BP1Q9Y3L3 701 aa26.32■■□□□ 1.8
SSBP3-202ENST00000357475 FAM72CH0Y354 149 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 DNA2P51530 1060 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 ARTNQ5T4W7 220 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 FAM72AQ5TYM5 149 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 FAM72DQ6L9T8 149 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 VITQ6UXI7 678 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 FAM72BQ86X60 149 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 UNC45BQ8IWX7 931 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 RSAD2Q8WXG1 361 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 SIK2Q9H0K1 926 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 AMFRQ9UKV5 643 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 AP4E1Q9UPM8 1137 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 HS3ST4Q9Y661 456 aa26.31■■□□□ 1.8
SSBP3-202ENST00000357475 ENC1O14682 589 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 SLC2A3P11169 496 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 TCF3P15923 654 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 SLC6A4P31645 630 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 GNG11P61952 73 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 SCAPQ12770 1279 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 FAM133BQ5BKY9 247 aaKnown RBP26.3■■□□□ 1.8
SSBP3-202ENST00000357475 MS4A13Q5J8X5 152 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 ERMARDQ5T6L9 678 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 MEI1Q5TIA1 1274 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 HTR3DQ70Z44 454 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 TDRD5Q8NAT2 981 aaKnown RBP26.3■■□□□ 1.8
SSBP3-202ENST00000357475 BTN2A3PQ96KV6 586 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 ZFP14Q9HCL3 533 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 WNT6Q9Y6F9 365 aa26.3■■□□□ 1.8
SSBP3-202ENST00000357475 ZFP37Q9Y6Q3 630 aaPredicted RBP26.3■■□□□ 1.8
SSBP3-202ENST00000357475 TRDMT1O14717 391 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 DDX3YO15523 660 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 CTNNA1P35221 906 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 VCPP55072 806 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 HADHQ16836 314 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 RAP1GAP2Q684P5 730 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 NYAP1Q6ZVC0 841 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 C14orf80Q86SX3 495 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 DDX42Q86XP3 938 aaKnown RBP eCLIP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 RHOT1Q8IXI2 618 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ATP6V0D2Q8N8Y2 350 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ALG3Q92685 438 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ASIC4Q96FT7 647 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 P2RY11Q96G91 374 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms