RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CHST3Q7LGC8 479 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 UNC5BQ8IZJ1 945 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZCCHC9Q8N567 271 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PLBD2Q8NHP8 589 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CCDC32Q9BV29 185 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SHCBP1LQ9BZQ2 653 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SAMSN1Q9NSI8 373 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 MAD2L2Q9UI95 211 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PRPF4O43172 522 aaKnown RBP eCLIP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ACADSBP45954 432 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 DENND5AQ6IQ26 1287 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SLITRK4Q8IW52 837 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ENDOVQ8N8Q3 282 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PYDC1Q8WXC3 89 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CNDP2Q96KP4 475 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SAYSD1Q9NPB0 183 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 LRRC10BA6NIK2 292 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 KHDRBS3O75525 346 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HTR2AP28223 471 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TYK2P29597 1187 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 NR1I3Q14994 352 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 UHMK1Q8TAS1 419 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 NR4A3Q92570 626 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PAGE5Q96GU1 130 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SLA2Q9H6Q3 261 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF334Q9HCZ1 680 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 USP27XA6NNY8 438 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HMGCRP04035 888 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SKP1P63208 163 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 LRRC38Q5VT99 294 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CIR1Q86X95 450 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TDRPQ86YL5 185 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SLC7A3Q8WY07 619 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TWNKQ96RR1 684 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TRIM2Q9C040 744 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 COPRSQ9NQ92 184 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 GDF3Q9NR23 364 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CHPF2Q9P2E5 772 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HAO1Q9UJM8 370 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PTPN22Q9Y2R2 807 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ATP6V1G2-DDX39BF2Z307 99 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 RTN2O75298 545 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 C8BP07358 591 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SFNP31947 248 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PLEKHG4Q58EX7 1191 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 GADL1Q6ZQY3 521 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PIGSQ96S52 555 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TCF12Q99081 682 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 BLZF1Q9H2G9 400 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 AAR2Q9Y312 384 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TTC34A8MYJ7 566 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SNX4O95219 450 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 FDPSP14324 419 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PPP2R1BP30154 601 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HNF4AP41235 474 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 NAMPTP43490 491 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 PTCD2Q8WV60 388 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZSCAN10Q96SZ4 725 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SEPT5Q99719 369 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 VANGL2Q9ULK5 521 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ADGRF5Q8IZF2 1346 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ATP6V0D1P61421 351 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 IFT80Q9P2H3 777 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TLL2Q9Y6L7 1015 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TPTEP56180 551 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 KDSRQ06136 332 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 NT5DC1Q5TFE4 455 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HERC2P3Q9BVR0 1158 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 EIF3LQ9Y262 564 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CFLARO15519 480 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CD40LGP29965 261 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 CCDC85BQ15834 202 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TTLL9Q3SXZ7 439 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZRANB3Q5FWF4 1079 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 HEATR6Q6AI08 1181 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 LINC00471Q8N535 108 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 RBM15BQ8NDT2 890 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF564Q8TBZ8 553 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 MRI1Q9BV20 369 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SPATA5L1Q9BVQ7 753 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 FOLH1BQ9HBA9 442 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 THUMPD1Q9NXG2 353 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 TMCC3Q9ULS5 477 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 ZFR2Q9UPR6 939 aaKnown RBP4.78□□□□□ -1.64
SYNE2-203ENST00000357395 BLIDQ8IZY5 108 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 REPS1Q96D71 796 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 SLC4A9Q96Q91 983 aa4.78□□□□□ -1.64
SYNE2-203ENST00000357395 S100A8P05109 93 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 CYP2C8P10632 490 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 CNTN1Q12860 1018 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 PDK3Q15120 406 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 PSMD5Q16401 504 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 PABPC1LQ4VXU2 614 aaKnown RBP4.77□□□□□ -1.65
SYNE2-203ENST00000357395 PRR5LQ6MZQ0 368 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 MMP27Q9H306 513 aa4.77□□□□□ -1.65
SYNE2-203ENST00000357395 E7ENX8 843 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms