RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 RIPK2O43353 540 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SEC24AO95486 1093 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 GTF2H1P32780 548 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ALDH5A1P51649 535 aaPredicted RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 ALFQ53S48 1182 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ADHFE1Q8IWW8 467 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 KLHL23Q8NBE8 558 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 TSPAN14Q8NG11 270 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 RPRD1BQ9NQG5 326 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 MTMR4Q9NYA4 1195 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 WWP2O00308 870 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 MRASO14807 208 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 MYL4P12829 197 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 HOXB6P17509 224 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 GTF2A2P52657 109 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ACLYP53396 1101 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 AP1S2P56377 157 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 PTENP60484 403 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 TGM3Q08188 693 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SLC45A4Q5BKX6 768 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 LMBRD2Q68DH5 695 aaPredicted RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SLC25A24Q6NUK1 477 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 C11orf63Q6NUN7 778 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 MYLPFQ96A32 169 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 RIT2Q99578 217 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ADCY6O43306 1168 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.32e-10■■■■■ 37.2
SMC4-202ENST00000357388 DLG4P78352 724 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ZNF398Q8TD17 642 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMC4-202ENST00000357388 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 CDH9Q9ULB4 789 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 HBS1LQ9Y450 684 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 DYRK1BQ9Y463 629 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SNAP91O60641 907 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 WFS1O76024 890 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 EPHB2P29323 1055 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SSTR3P32745 418 aaPredicted RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 SLC26A3P40879 764 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ACOT2P49753 483 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 VPS72Q15906 364 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 CD302Q8IX05 232 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 AP3S1Q92572 193 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ANKZF1Q9H8Y5 726 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 CHKBQ9Y259 395 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 USP42Q9H9J4 1324 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 STARP49675 285 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 ERVK-24P63145 666 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 FASTKQ14296 549 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 MYDGFQ969H8 173 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 DPY30Q9C005 99 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 GPAMQ9HCL2 828 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 TIMMDC1Q9NPL8 285 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 DMTF1Q9Y222 760 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 NDUFB10O96000 172 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 GARTP22102 1010 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 GRK3P35626 688 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 ETFBP38117 255 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 PRKCEQ02156 737 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 SCARF1Q14162 830 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 MFSD4BQ5TF39 518 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 ABRAXAS1Q6UWZ7 409 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 AKAP14Q86UN6 197 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 STK32CQ86UX6 486 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 LRRC71Q8N4P6 559 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 EEF1AKMT1Q8WVE0 214 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 PLEKHG4BQ96PX9 1271 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 HPS4Q9NQG7 708 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.33e-18■■■■■ 78.4
SMC4-202ENST00000357388 JCADQ9P266 1359 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 RPL10AP62906 217 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
SMC4-202ENST00000357388 STRA8Q7Z7C7 330 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 POC5Q8NA72 575 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 ENTPD7Q9NQZ7 604 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 TMCO1Q9UM00 188 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
SMC4-202ENST00000357388 IGSF9BQ9UPX0 1349 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms