RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MCIDASD6RGH6 385 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 EXTL3O43909 919 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TSPAN19P0C672 248 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 FDX1P10109 184 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 POLR2EP19388 210 aaKnown RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TYMPP19971 482 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CLK3P49761 638 aaKnown RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 GEMP55040 296 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 RASGRP2Q7LDG7 609 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TDRD5Q8NAT2 981 aaKnown RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TRPV3Q8NET8 790 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ASXL3Q9C0F0 2248 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 O00370 1275 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 IL12RB1P42701 662 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 DSG1Q02413 1049 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 DEFB129Q9H1M3 183 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 FAM50BQ9Y247 325 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CRYL1Q9Y2S2 319 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 SF3B1O75533 1304 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 FARP2O94887 1054 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CYP4F2P78329 520 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CYP4F3Q08477 520 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ZDHHC6Q9H6R6 413 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ADGBQ8N7X0 1667 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TMEM114B3SHH9 223 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ZNF37AP17032 561 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 RASSF6Q6ZTQ3 369 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 FAM124AQ86V42 546 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 DHRS1Q96LJ7 313 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 NEK6Q9HC98 313 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TRIM39Q9HCM9 518 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ANGPT4Q9Y264 503 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 PJA1Q8NG27 643 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 RERGQ96A58 199 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 GPAMQ9HCL2 828 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 GRXCR2A6NFK2 248 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 SEC22BO75396 215 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 KIRREL3Q8IZU9 778 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 TMEM79Q9BSE2 394 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 LIMD1Q9UGP4 676 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CCDC154A6NI56 674 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 OR7A10O76100 309 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 ACAT1P24752 427 aaKnown RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 RPL10AP62906 217 aaKnown RBP17.65■□□□□ 0.42
COL27A1-201ENST00000356083 LPAR1Q92633 364 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 PROX1Q92786 737 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 CAB39LQ9H9S4 337 aa17.65■□□□□ 0.42
COL27A1-201ENST00000356083 PSIP1O75475 530 aaKnown RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ITIH2P19823 946 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 PLK1P53350 603 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 AP1S2P56377 157 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ARMC3Q5W041 872 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 KRT74Q7RTS7 529 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 CATSPER2Q96P56 530 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 STK39Q9UEW8 545 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 MSRAQ9UJ68 235 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 MYH15Q9Y2K3 1946 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 BNC1Q01954 994 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 CCDC144BQ3MJ40 725 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 LPCAT1Q8NF37 534 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ZNF473Q8WTR7 871 aaKnown RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 VPS33BQ9H267 617 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 TRIM17Q9Y577 477 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 BCAP31P51572 246 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 KRR1Q13601 381 aaKnown RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 RIPOR1Q6ZS17 1223 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 MCOLN3Q8TDD5 553 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 CELF6Q96J87 481 aaKnown RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ING3Q9NXR8 418 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 TUBE1Q9UJT0 475 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 LIN7AO14910 233 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 MYL12BO14950 172 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 AP5B1Q2VPB7 878 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ABHD14A-ACY1A0A1B0GW23 586 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 FOXN1O15353 648 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 NDUFB10O96000 172 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 JCHAINP01591 159 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 CLCN3P51790 818 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ATP1A4Q13733 1029 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 AGPAT5Q9NUQ2 364 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 KPNA5O15131 536 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 GEMIN4P57678 1058 aaKnown RBP17.64■□□□□ 0.41
COL27A1-201ENST00000356083 MIEF2Q96C03 454 aa17.64■□□□□ 0.41
COL27A1-201ENST00000356083 ANKDD1BA6NHY2 528 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 MYMKA6NI61 221 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 ITPKBP27987 946 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 PNPLA4P41247 253 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 PSMD4P55036 377 aaKnown RBP17.63■□□□□ 0.41
COL27A1-201ENST00000356083 FAM131BQ86XD5 332 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 PPIL6Q8IXY8 311 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 DNAJC9Q8WXX5 260 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 GSAPA4D1B5 854 aa17.63■□□□□ 0.41
COL27A1-201ENST00000356083 STARP49675 285 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms