RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SYCE1LA8MT33 242 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 SLC26A4O43511 780 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 FGFR2P21802 821 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 IDUAP35475 653 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 NR4A2P43354 598 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GRM4Q14833 912 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 RAB39AQ14964 217 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 NRF1Q16656 503 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 INAVAQ3KP66 663 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 PPP6R3Q5H9R7 873 aaPredicted RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 CEP78Q5JTW2 689 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ATAD3BQ5T9A4 648 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ZC3H7AQ8IWR0 971 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 SIX6OS1Q8N1H7 587 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GLIS1Q8NBF1 620 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GIMAP1Q8WWP7 306 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 BRIP1Q9BX63 1249 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 C20orf27Q9GZN8 174 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 NAA50Q9GZZ1 169 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 BAZ2AQ9UIF9 1905 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 SFI1A8K8P3 1242 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 BANF1O75531 89 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 KRT6AP02538 564 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 KRT6BP04259 564 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 FDX1P10109 184 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 RALAP11233 206 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 DDX5P17844 614 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 GRM5P41594 1212 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 GRSF1Q12849 480 aaKnown RBP eCLIP16.18■□□□□ 0.18
RTN3-205ENST00000356000 IKBKEQ14164 716 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 FLOT2Q14254 428 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 ZNF846Q147U1 533 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PCSK7Q16549 785 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 RNASEH2BQ5TBB1 312 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 ADGRA1Q86SQ6 560 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 ZBTB46Q86UZ6 589 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 CLIP4Q8N3C7 705 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 DLG3Q92796 817 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 IFT122Q9HBG6 1241 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 C6orf50Q9HD87 102 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PRPF19Q9UMS4 504 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 ST14Q9Y5Y6 855 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 ASTN1O14525 1302 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 MAGEB6P1A0A0J9YX57 407 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 GOLGA8QA0A0J9YX86 632 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 GOLGA8OA6NCC3 632 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 SMCO2A6NFE2 343 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 E9PMD0 336 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 GOLGA8NF8WBI6 632 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PTPN1P18031 435 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 M6PRP20645 277 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 CYP7A1P22680 504 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 NAPAP54920 295 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 GNG2P59768 71 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 FOXD4Q12950 439 aaPredicted RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 PERM1Q5SV97 790 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 CDHR3Q6ZTQ4 885 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 HAUS6Q7Z4H7 955 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 SLC51BQ86UW2 128 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 CACTIN-AS1Q8N1I8 211 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 NACC1Q96RE7 527 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 YME1L1Q96TA2 773 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 HEMGNQ9BXL5 484 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 COQ10BQ9H8M1 238 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PARVAQ9NVD7 372 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PI4KBQ9UBF8 816 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
RTN3-205ENST00000356000 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
RTN3-205ENST00000356000 PLOD2O00469 737 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 BCL10O95999 233 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 CCNA2P20248 432 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 RFX1P22670 979 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 NKX2-5P52952 324 aaPredicted RBP16.17■□□□□ 0.18
RTN3-205ENST00000356000 MLLT10P55197 1068 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
RTN3-205ENST00000356000 ZUFSPQ96AP4 578 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 CNDP2Q96KP4 475 aaKnown RBP16.17■□□□□ 0.18
RTN3-205ENST00000356000 SERPINI1Q99574 410 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 TRIT1Q9H3H1 467 aaKnown RBP16.17■□□□□ 0.18
RTN3-205ENST00000356000 GINM1Q9NU53 330 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 ARAP2Q8WZ64 1704 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 CROCCQ5TZA2 2017 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 CLDN25C9JDP6 229 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 COPEO14579 308 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 SLC5A1P13866 664 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 TM4SF1P30408 202 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 PEX6Q13608 980 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 TMC5Q6UXY8 1006 aa16.17■□□□□ 0.18
RTN3-205ENST00000356000 NSMFQ6X4W1 530 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms