RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 KRT83P78385 493 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 NTHL1P78549 312 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 SIM2Q14190 667 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 SURF1Q15526 300 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 SNRNP35Q16560 246 aaKnown RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 AASDHQ4L235 1098 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 ZC2HC1CQ53FD0 456 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 E4F1Q66K89 784 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 LILRA6Q6PI73 481 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 ZNF852Q6ZMS4 543 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 TMPRSS7Q7RTY8 843 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 APBB1IPQ7Z5R6 666 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 GRASPQ7Z6J2 395 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 PALB2Q86YC2 1186 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 GPD1LQ8N335 351 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 UBE2Q2Q8WVN8 375 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FGF13Q92913 245 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FAXDC2Q96IV6 333 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FAM193BQ96PV7 902 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 KXD1Q9BQD3 176 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 MRPL4Q9BYD3 311 aaKnown RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 TSGA10Q9BZW7 698 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 CCDC113Q9H0I3 377 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FAM124BQ9H5Z6 455 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 GPRC5CQ9NQ84 441 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 RRAGDQ9NQL2 400 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 HEBP1Q9NRV9 189 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 CHST7Q9NS84 486 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 PRMT7Q9NVM4 692 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FNIP2Q9P278 1114 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FBXW11Q9UKB1 542 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 TLR6Q9Y2C9 796 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 PAXBP1Q9Y5B6 917 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 A0A087WZ62 844 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 A0A0B4J269 797 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 TMEM150BA6NC51 233 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 TMEM8BA6NDV4 472 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 EIF3CLB5ME19 914 aaKnown RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 K7ERI5 159 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ACKR2O00590 384 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 POMCP01189 267 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 HNRNPA1P09651 372 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 UCHL3P15374 230 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ADSSP30520 456 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 HOXA9P31269 272 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 PRKCIP41743 596 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 OR1G1P47890 313 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 LIG4P49917 911 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 MXI1P50539 228 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 VAMP7P51809 220 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ADKP55263 362 aaKnown RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 PTENP60484 403 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 MYL7Q01449 175 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 RPL6Q02878 288 aaKnown RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 CREMQ03060 361 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 LAMTOR4Q0VGL1 99 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 DRP2Q13474 957 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 CAPSQ13938 189 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 MAPK6Q16659 721 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 DCAF17Q5H9S7 520 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 C10orf76Q5T2E6 689 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 LIN9Q5TKA1 542 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 TRIM65Q6PJ69 517 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ENOSF1Q7L5Y1 443 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 CATSPER4Q7RTX7 472 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 CACNA2D4Q7Z3S7 1137 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 C1QL4Q86Z23 238 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 COLGALT2Q8IYK4 626 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 GPR65Q8IYL9 337 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ABHD4Q8TB40 342 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ITFG1Q8TB96 612 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 DNASE1L2Q92874 299 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 PPP1R13BQ96KQ4 1090 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 ZNF830Q96NB3 372 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 EIF3CQ99613 913 aaKnown RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 INO80BQ9C086 356 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 DUSP15Q9H1R2 295 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-201ENST00000355766 GANQ9H2C0 597 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 AGPAT5Q9NUQ2 364 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 AIPL1Q9NZN9 384 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 GCNT4Q9P109 453 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 PPP2R2CQ9Y2T4 447 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 COQ4Q9Y3A0 265 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 PCDHB2Q9Y5E7 798 aa7.4□□□□□ -1.22
VPS13A-201ENST00000355766 LRRIQ4A6NIV6 560 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 ZNF233A6NK53 670 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 F8W810 466 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 ECI2O75521 394 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 KCNK5O95279 499 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 NDUFA10O95299 355 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SERPING1P05155 500 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 POU2F2P09086 479 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 RPL17P18621 184 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PROZP22891 400 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PON1P27169 355 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms