RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 PSEN1P49768 467 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 GBE1Q04446 702 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC10A2Q12908 348 aaPredicted RBP23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC45A4Q5BKX6 768 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 SDHAF4Q5VUM1 108 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 DENND2CQ68D51 928 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 PPIL6Q8IXY8 311 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 OLFM3Q96PB7 478 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 QKIQ96PU8 341 aaKnown RBP eCLIP23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 SEMA4AQ9H3S1 761 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 DTLQ9NZJ0 730 aa23.64■■□□□ 1.37
SCAMP3-202ENST00000355379 KIAA1671Q9BY89 1806 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 DCLK1O15075 740 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 CREB3O43889 395 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 PPP2R5DQ14738 602 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 MGAT5BQ3V5L5 792 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 CCDC25Q86WR0 208 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 HAPLN3Q96S86 360 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 EPAS1Q99814 870 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 PHACTR1Q9C0D0 580 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 CRISPLD1Q9H336 500 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 ETNK2Q9NVF9 386 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 CLIC5Q9NZA1 410 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 PAK5Q9P286 719 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 HSFX1Q9UBD0 423 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC27A5Q9Y2P5 690 aa23.63■■□□□ 1.37
SCAMP3-202ENST00000355379 POLR3GO15318 223 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 KCNN4O15554 427 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 RIPK2O43353 540 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 HSPA1AP0DMV8 641 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 HSPA1BP0DMV9 641 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 RBL1P28749 1068 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 HTR7P34969 479 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 ACTN2P35609 894 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 PGFP49763 221 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 TPI1P60174 286 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 USP46P62068 366 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 BTG3Q14201 252 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 KIAA1841Q6NSI8 718 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 PDZD4Q76G19 769 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 COLGALT1Q8NBJ5 622 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 CASP10Q92851 521 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 RNF34Q969K3 372 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 TMEM169Q96HH4 297 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 SERPINB11Q96P15 392 aa23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 CDC42EP4Q9H3Q1 356 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-202ENST00000355379 WDR27A2RRH5 827 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 FAM72CH0Y354 149 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 CCR1P32246 355 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 TUFMP49411 452 aaKnown RBP23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 DSG1Q02413 1049 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 ZNF844Q08AG5 666 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 DUSP4Q13115 394 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 CEP85LQ5SZL2 805 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 FAM72AQ5TYM5 149 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 FAM72DQ6L9T8 149 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 CROCCP2Q86T23 111 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 FAM72BQ86X60 149 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 NAT8LQ8N9F0 302 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 CPT1BQ92523 772 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 PRCCQ92733 491 aaPredicted RBP23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 SEPT5Q99719 369 aaPredicted RBP23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 TMBIM4Q9HC24 238 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 OLA1Q9NTK5 396 aaKnown RBP23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 OSER1Q9NX31 292 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 SPG21Q9NZD8 308 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 GMIPQ9P107 970 aa23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 MRPL42Q9Y6G3 142 aaKnown RBP23.61■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC29A2Q14542 456 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 UBE2Q1Q7Z7E8 422 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 FBXO32Q969P5 355 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 ZBTB9Q96C00 473 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 TMEM109Q9BVC6 243 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 TTLL2Q9BWV7 592 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 TLR8Q9NR97 1041 aaKnown RBP23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 OR12D3Q9UGF7 316 aa23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 AFF4Q9UHB7 1163 aaKnown RBP23.6■■□□□ 1.37
SCAMP3-202ENST00000355379 GOLGA6L10A6NI86 522 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 ADAM12O43184 909 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 MFSD11O43934 449 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 GCATO75600 419 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 ACRP10323 421 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 ERCC2P18074 760 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 OR1D2P34982 312 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 GLUD2P49448 558 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 PDK1Q15118 436 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 TPGS2Q68CL5 300 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 DDX53Q86TM3 631 aaKnown RBP23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 GPR65Q8IYL9 337 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 TFB1MQ8WVM0 346 aaKnown RBP23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 ARL8AQ96BM9 186 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 VPS18Q9P253 973 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 SFMBT1Q9UHJ3 866 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 TLR6Q9Y2C9 796 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 MFHAS1Q9Y4C4 1052 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 C5orf60A6NFR6 353 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 SLC38A8A6NNN8 435 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 SOAT2O75908 522 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 TTC4O95801 387 aa23.59■■□□□ 1.37
SCAMP3-202ENST00000355379 MYZAPP0CAP1 466 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms