RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ATF7P17544 494 aaPredicted RBP11.17□□□□□ -0.62
SND1-201ENST00000354725 KRT4P19013 534 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 TCEA1P23193 301 aaKnown RBP11.17□□□□□ -0.62
SND1-201ENST00000354725 PBLDP30039 288 aaPredicted RBP11.17□□□□□ -0.62
SND1-201ENST00000354725 CAV1Q03135 178 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 SEPT6Q14141 434 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 GRB14Q14449 540 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 RBM44Q6ZP01 1051 aaKnown RBP11.17□□□□□ -0.62
SND1-201ENST00000354725 RNF207Q6ZRF8 634 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 LSMEM1Q8N8F7 131 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 SEPT11Q9NVA2 429 aaKnown RBP11.17□□□□□ -0.62
SND1-201ENST00000354725 HACD3Q9P035 362 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 TELO2Q9Y4R8 837 aa11.17□□□□□ -0.62
SND1-201ENST00000354725 DKC1O60832 514 aaKnown RBP eCLIP11.16□□□□□ -0.625e-6■■■■□ 19.3
SND1-201ENST00000354725 CREB1P16220 341 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 KLRC2P26717 231 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
SND1-201ENST00000354725 GNA13Q14344 377 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 CLEC16AQ2KHT3 1053 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 SPDYAQ5MJ70 313 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 ACAD10Q6JQN1 1059 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 KLHDC10Q6PID8 442 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 CORO6Q6QEF8 472 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 XXYLT1Q8NBI6 393 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 CHURC1Q8WUH1 139 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 INPP5DQ92835 1189 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 SNF8Q96H20 258 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 ACCSQ96QU6 501 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 VRTNQ9H8Y1 702 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 HAT1O14929 419 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 SCGB1D2O95969 90 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 SPCS2Q15005 226 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 DENND1AQ8TEH3 1009 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 PYROXD1Q8WU10 500 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 DPF3Q92784 378 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
SND1-201ENST00000354725 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 DCLK3Q9C098 648 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 SYNDIG1Q9H7V2 258 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 ANK1P16157 1881 aa11.16□□□□□ -0.62
SND1-201ENST00000354725 KRBA1A5PL33 1030 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 CAPN9O14815 690 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MTSS1O43312 755 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 RNASEH1O60930 286 aaKnown RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 KRT13P13646 458 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MTHFRP42898 656 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 THOP1P52888 689 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 PHKG1Q16816 387 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MTERF2Q49AM1 385 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 BRDTQ58F21 947 aaPredicted RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 TDRPQ86YL5 185 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MAP4K3Q8IVH8 894 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MAML1Q92585 1016 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 NTPCRQ9BSD7 190 aaKnown RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 TEKT3Q9BXF9 490 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 PLGRKTQ9HBL7 147 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 LAMP5Q9UJQ1 280 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 DNAJC16Q9Y2G8 782 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 UBIAD1Q9Y5Z9 338 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
SND1-201ENST00000354725 TMEM120BA0PK00 339 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 EPHB2P29323 1055 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 HAAOP46952 286 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 CENPCQ03188 943 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 KRT17Q04695 432 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 CEP78Q5JTW2 689 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 SLC39A4Q6P5W5 647 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 NATD1Q8N6N6 113 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 PIP4K2CQ8TBX8 421 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MAGEB18Q96M61 343 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 FAM50BQ9Y247 325 aa11.15□□□□□ -0.62
SND1-201ENST00000354725 MCM3APO60318 1980 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 K7ENM7 598 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 TBX10O75333 385 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.63
SND1-201ENST00000354725 GCLMP48507 274 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 GCNT1Q02742 428 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 MESDQ14696 234 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 MTFR1Q15390 333 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 LURAP1LQ8IV03 231 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.15□□□□□ -0.63
SND1-201ENST00000354725 RSAD2Q8WXG1 361 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 SLC39A13Q96H72 371 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 BTBD6Q96KE9 485 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 CTRCQ99895 268 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 ARNT2Q9HBZ2 717 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 ENAMQ9NRM1 1142 aa11.15□□□□□ -0.63
SND1-201ENST00000354725 NINJ2Q9NZG7 142 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms