RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ACSL1P33121 698 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 GRIA4P48058 902 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 ZNF132P52740 706 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 MFAP3P55082 362 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 ORC1Q13415 861 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 ALCAMQ13740 583 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 PRAMEF14Q5SWL7 426 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 HES3Q5TGS1 186 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 SERPINA13PQ6UXR4 307 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 SV2BQ7L1I2 683 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 CCDC127Q96BQ5 260 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 COMMD8Q9NX08 183 aa11.77□□□□□ -0.53
RTN3-204ENST00000354497 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.77□□□□□ -0.53
RTN3-204ENST00000354497 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.53
RTN3-204ENST00000354497 TENM4Q6N022 2769 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 KIAA0391O15091 583 aaKnown RBP11.76□□□□□ -0.53
RTN3-204ENST00000354497 NPC1O15118 1278 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 CYP26A1O43174 497 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 PCDHGA12O60330 932 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 PHACTR2O75167 634 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 SEMA4FO95754 770 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 ITGAVP06756 1048 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 CCDC130P13994 396 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 ABCB4P21439 1286 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 MAP3K7CLP57077 242 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 MYL6P60660 151 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 CT47A1Q5JQC4 288 aaPredicted RBP11.76□□□□□ -0.53
RTN3-204ENST00000354497 KCNT1Q5JUK3 1230 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 C10orf120Q5SQS8 335 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 ANKS1BQ7Z6G8 1248 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 DNAJC19Q96DA6 116 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
RTN3-204ENST00000354497 CGRRF1Q99675 332 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 PCED1AQ9H1Q7 454 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 FBXO44Q9H4M3 255 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 CLMPQ9H6B4 373 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 PANK4Q9NVE7 773 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 HSPBP1Q9NZL4 362 aa11.76□□□□□ -0.53
RTN3-204ENST00000354497 BRINP1O60477 761 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 IGLV3-19P01714 112 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 RARGP13631 454 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
RTN3-204ENST00000354497 ADORA2BP29275 332 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ACTN2P35609 894 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 CTSKP43235 329 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 BCAT1P54687 386 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 FNDC3BQ53EP0 1204 aaKnown RBP11.75□□□□□ -0.53
RTN3-204ENST00000354497 PAQR9Q6ZVX9 377 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 CCDC91Q7Z6B0 441 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ACOT1Q86TX2 421 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 EID2Q8N6I1 236 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ZNF366Q8N895 744 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 FAM181AQ8N9Y4 354 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
RTN3-204ENST00000354497 GANCQ8TET4 914 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 FGF11Q92914 225 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 BIRC7Q96CA5 298 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 P2RY11Q96G91 374 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 TMEM176AQ96HP8 235 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 TNIP3Q96KP6 325 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 LGMNQ99538 433 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 SMOQ99835 787 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ACE2Q9BYF1 805 aaPredicted RBP11.75□□□□□ -0.53
RTN3-204ENST00000354497 BTBD1Q9H0C5 482 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 OLFML3Q9NRN5 406 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 OSER1Q9NX31 292 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 ELOVL2Q9NXB9 296 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 IL37Q9NZH6 218 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 STK17AQ9UEE5 414 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 RASAL2Q9UJF2 1139 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 SLC27A6Q9Y2P4 619 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 PCDHGA1Q9Y5H4 931 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 KALRNO60229 2985 aa11.75□□□□□ -0.53
RTN3-204ENST00000354497 A0A1W2PQH9 124 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FAM47DPA6NHR8 397 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 ERVH48-1M5A8F1 160 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 BEST1O76090 585 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 BMP15O95972 392 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 DNTTP04053 509 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 CYBBP04839 570 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 CD27P26842 260 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 TXLNAP40222 546 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 CYP2J2P51589 502 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 KCNC4Q03721 635 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 TLE3Q04726 772 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 BIRC3Q13489 604 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 ENPP2Q13822 863 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 E2F5Q15329 346 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 SNRNP35Q16560 246 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms