RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PMF1-BGLAPU3KQ54 211 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 BRWD3Q6RI45 1802 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 KIAA0556O60303 1618 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 VILLO15195 856 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CTIFO43310 598 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ALAS1P13196 640 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 IDEP14735 1019 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GATA3P23771 443 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 APOBEC3AP31941 199 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PAFAH1B1P43034 410 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GATMP50440 423 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 RPL15P61313 204 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 OCA2Q04671 838 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM115Q12893 351 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MTAPQ13126 283 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 DCTN1Q14203 1278 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 EIF4A2Q14240 407 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 WTAPQ15007 396 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AMOTQ4VCS5 1084 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C1orf141Q5JVX7 400 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF648Q5T619 568 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TMPRSS9Q7Z410 1059 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FITM2Q8N6M3 262 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ATG4AQ8WYN0 398 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM125Q96AQ2 219 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ARRDC3Q96B67 414 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FAM120BQ96EK7 910 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CPPED1Q9BRF8 314 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FUZQ9BT04 418 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 KLHL4Q9C0H6 718 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC6A17Q9H1V8 727 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SAP30LQ9HAJ7 183 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GOLGA2P5Q9HBQ8 144 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CD248Q9HCU0 757 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC177Q9NQR7 707 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 DECR2Q9NUI1 292 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 USP22Q9UPT9 525 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TTLL3Q9Y4R7 772 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 RAD54BQ9Y620 910 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CSMD3Q7Z407 3707 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CCDC187A0A096LP49 1063 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ZAR1LA6NP61 321 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 VWC2LB2RUY7 222 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SLC7A4O43246 635 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CCP110O43303 1012 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ENTPD3O75355 529 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C22orf31O95567 290 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AMHP03971 560 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CYP1A1P04798 512 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 APOA4P06727 396 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FESP07332 822 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 WEE2P0C1S8 567 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C6P13671 934 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ALOX12P18054 663 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MUTP22033 750 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 VAMP2P63027 116 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 FAM189BP81408 668 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 DDR1Q08345 913 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TMEM266Q2M3C6 531 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AP5B1Q2VPB7 878 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GKAP1Q5VSY0 366 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CYP20A1Q6UW02 462 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PLPPR4Q7Z2D5 763 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MAVSQ7Z434 540 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 VSIG1Q86XK7 387 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TXNDC5Q8NBS9 432 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SHCBP1Q8NEM2 672 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 GABPB2Q8TAK5 448 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SNRNP27Q8WVK2 155 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ATP6V1E2Q96A05 226 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 KIF1BPQ96EK5 621 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 NR1H4Q96RI1 486 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 WDR35Q9P2L0 1181 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PI4KBQ9UBF8 816 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SARDHQ9UL12 918 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ZBTB1Q9Y2K1 713 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ADGBQ8N7X0 1667 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 PCLOQ9Y6V0 5065 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 NUP188Q5SRE5 1749 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ARHGEF28Q8N1W1 1705 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 C17orf100A8MU93 164 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 UBE2CO00762 179 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 TEX33O43247 280 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 B4GALT3O60512 393 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CCNT2O60583 730 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CDC14BO60729 498 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 SPARCP09486 303 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 LAMP2P13473 410 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 IL11P20809 199 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 CHMP24386 653 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 RBL1P28749 1068 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 EIF2DP41214 584 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 UBXN2AP68543 259 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 ACVR2BQ13705 512 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 USP10Q14694 798 aaKnown RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 INSCQ1MX18 579 aa1.79□□□□□ -2.12
BRCA1-202ENST00000354071 AASDHQ4L235 1098 aaPredicted RBP1.79□□□□□ -2.12
BRCA1-202ENST00000354071 MPZL3Q6UWV2 235 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms