RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 MYL2P10916 166 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 CARSP49589 748 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 UBXN2BQ14CS0 331 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 PRSS55Q6UWB4 352 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 EFL1Q7Z2Z2 1120 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 PHACTR4Q8IZ21 702 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 PLK2Q9NYY3 685 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 IGLV3-22A0A075B6J6 115 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 HACD1B0YJ81 288 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 CAND2O75155 1236 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 SPAG7O75391 227 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 ALDH1A2O94788 518 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 C22orf31O95567 290 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 TM4SF4P48230 202 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 MAPK7Q13164 816 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 EFTUD2Q15029 972 aaKnown RBP eCLIP16.86■□□□□ 0.294e-7■■■■□ 22
SMARCA4-201ENST00000344626 TAF11Q15544 211 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 HOMEZQ8IX15 550 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 PPP1R16AQ96I34 528 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 ELAC2Q9BQ52 826 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 C2orf49Q9BVC5 232 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 CLPBQ9H078 707 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 DLG5Q8TDM6 1919 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 POM121L1PQ3SYA9 428 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 OSGEPQ9NPF4 335 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 AASDHPPTQ9NRN7 309 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 UBA2Q9UBT2 640 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 PDZK1P1A8MUH7 402 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 SP2Q02086 613 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 FAM83EQ2M2I3 478 aa16.86■□□□□ 0.29
SMARCA4-201ENST00000344626 ZNF536O15090 1300 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 MAGEB16A2A368 324 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 GJA5P36382 358 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 ARFIP2P53365 341 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 CAPRIN1Q14444 709 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 ECHDC2Q86YB7 292 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 GRAMD1AQ96CP6 724 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 MRPS17Q9Y2R5 130 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 PRRC2BQ5JSZ5 2229 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 GLI3P10071 1580 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 ZW10O43264 779 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 PLA2G4AP47712 749 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 ACTRT1Q8TDG2 376 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 VAT1Q99536 393 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 NDE1Q9NXR1 346 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 GRID1Q9ULK0 1009 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 LIG3P49916 1009 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 WASHC5Q12768 1159 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 FAXCQ5TGI0 409 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 NLRP9Q7RTR0 991 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 BSNDQ8WZ55 320 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 ZCCHC2Q9C0B9 1178 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 PDZD7Q9H5P4 517 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 TRUB2O95900 331 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 PFKMP08237 780 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 RAP1GAP2Q684P5 730 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 SEPT3Q9UH03 358 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 SLC39A10Q9ULF5 831 aa16.85■□□□□ 0.29
SMARCA4-201ENST00000344626 SIGLEC16A6NMB1 481 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 WNT7AO00755 349 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 PER2O15055 1255 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 APOA4P06727 396 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 TAF10Q12962 218 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.294e-7■■□□□ 11.7
SMARCA4-201ENST00000344626 METTL3Q86U44 580 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 SRPK1Q96SB4 655 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 FUCA2Q9BTY2 467 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 TADA3O75528 432 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 ABCE1P61221 599 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 ECM1Q16610 540 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 C12orf29Q8N999 325 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 GRIN3AQ8TCU5 1115 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 KAT5Q92993 513 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 MRGBPQ9NV56 204 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 CCDC22O60826 627 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 ATP5HO75947 161 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 IL1BP01584 269 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 PBLDP30039 288 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 TCEA2Q15560 299 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 COLGALT1Q8NBJ5 622 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 SLC26A7Q8TE54 656 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 DEC1Q9P2X7 70 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 WASP42768 502 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 BCL2L1Q07817 233 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 DENND1BQ6P3S1 775 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 LRRC55Q6ZSA7 311 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 LPCAT1Q8NF37 534 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 APOL2Q9BQE5 337 aa16.84■□□□□ 0.29
SMARCA4-201ENST00000344626 OPHN1O60890 802 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 F2P00734 622 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 PLCL1Q15111 1095 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 ARSHQ5FYA8 562 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 SPDYAQ5MJ70 313 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 AGAP9Q5VTM2 703 aa16.83■□□□□ 0.29
SMARCA4-201ENST00000344626 WDR59Q6PJI9 974 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms