RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 ANAPC2Q9UJX6 822 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.17
TRIO-202ENST00000344204 CSPG5O95196 566 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 ALAS1P13196 640 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.18
TRIO-202ENST00000344204 PRKAA2P54646 552 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 LSM3P62310 102 aaKnown RBP13.96□□□□□ -0.18
TRIO-202ENST00000344204 SLC9A5Q14940 896 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.18
TRIO-202ENST00000344204 ZNF669Q96BR6 464 aaPredicted RBP13.96□□□□□ -0.18
TRIO-202ENST00000344204 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.18
TRIO-202ENST00000344204 ARCQ7LC44 396 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 NCKIPSDQ9NZQ3 722 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 KCND2Q9NZV8 630 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 SNX7Q9UNH6 387 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 ANKRD6Q9Y2G4 727 aa13.96□□□□□ -0.18
TRIO-202ENST00000344204 PARNO95453 639 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 PSMD3O43242 534 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RBP3P10745 1247 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 ANTXR2P58335 489 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ST3GAL1Q11201 340 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 C7orf31Q8N865 590 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 KCTD4Q8WVF5 259 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 FAM237BA0A1B0GVD1 139 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 PDGFRBP09619 1106 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 DBTP11182 482 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 PORP16435 677 aaPredicted RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 TTC39CQ8N584 583 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 MCPH1Q8NEM0 835 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ART4Q93070 314 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RTKNQ9BST9 563 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 HIPK3Q9H422 1215 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 C3orf70A6NLC5 250 aaPredicted RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 ZNF263O14978 683 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 LPCAT4Q643R3 524 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 HES6Q96HZ4 224 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 REEP2Q9BRK0 252 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 EPHA10Q5JZY3 1008 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 FAM172AQ8WUF8 416 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 KBTBD4Q9NVX7 518 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 SFMBT1Q9UHJ3 866 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 DCAF4Q8WV16 495 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RERGLQ9H628 205 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 SARS2Q9NP81 518 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 ITGA11Q9UKX5 1188 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RPS6KL1Q9Y6S9 549 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 IFI30P13284 250 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ADSLP30566 484 aaPredicted RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 ENPEPQ07075 957 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ABCB5Q2M3G0 1257 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 THNSL1Q8IYQ7 743 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 AP3S1Q92572 193 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 TLCD1Q96CP7 247 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RNFT2Q96EX2 444 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 PHF24Q9UPV7 400 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
TRIO-202ENST00000344204 HERC3Q15034 1050 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 AGAP9Q5VTM2 703 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 DENND5BQ6ZUT9 1274 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 OR8H3Q8N146 312 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 RNF145Q96MT1 663 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 VPS4AQ9UN37 437 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 K7ERI5 159 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 TK2O00142 265 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 ATP9BO43861 1147 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 COQ9O75208 318 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 MYBP10242 640 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 GRIA3P42263 894 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 STAP1Q9ULZ2 295 aa13.95□□□□□ -0.18
TRIO-202ENST00000344204 CCDC157Q569K6 752 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 NCANO14594 1321 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 IFNA16P05015 189 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 NFYCQ13952 458 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 LXNQ9BS40 222 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 TAF6LQ9Y6J9 622 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 TDP2O95551 362 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 BMP3P12645 472 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 CCT8P50990 548 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GTF2IP78347 998 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ANKRD23Q86SG2 305 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 RNASE11Q8TAA1 199 aaKnown RBP13.94□□□□□ -0.18
TRIO-202ENST00000344204 NSMCE2Q96MF7 247 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 TEX28O15482 410 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GH1P01241 217 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 GCP02774 474 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 ZNF394Q53GI3 561 aa13.94□□□□□ -0.18
TRIO-202ENST00000344204 RRM2BQ7LG56 351 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms