RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TPGS2Q68CL5 300 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 TTC30AQ86WT1 665 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 MFSD6LQ8IWD5 586 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 KLHL7Q8IXQ5 586 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 IFT20Q8IY31 132 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 C12orf29Q8N999 325 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 UBA3Q8TBC4 463 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 MSANTD3Q96H12 275 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 SENP8Q96LD8 212 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 AP1M1Q9BXS5 423 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 SLC4A5Q9BY07 1137 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 DPEP3Q9H4B8 488 aa14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 METTL5Q9NRN9 209 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-202ENST00000344114 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 CHURC1-FNTBB4DL54 471 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 H7C4K7 107 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 GABRDO14764 452 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 RAD51CO43502 376 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 ODC1P11926 461 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 SCNN1AP37088 669 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 CETN2P41208 172 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 LHX1P48742 406 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 FNTBP49356 437 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 C1orf228Q6PIY5 440 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 MAATS1Q7Z4T9 603 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 LONP2Q86WA8 852 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 ANKRD52Q8NB46 1076 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 LEMD2Q8NC56 503 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 B3GALNT2Q8NCR0 500 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 EXD1Q8NHP7 514 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 RBM41Q96IZ5 413 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 ST7Q9NRC1 585 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 ZNF446Q9NWS9 450 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 TJP2Q9UDY2 1190 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 DMGDHQ9UI17 866 aaKnown RBP14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 MAFFQ9ULX9 164 aa14.06□□□□□ -0.16
HERPUD1-202ENST00000344114 KIF26AQ9ULI4 1882 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 E5RJQ4 531 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 SART1O43290 800 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 PSMA2P25787 234 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 PMLP29590 882 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 CHRNA3P32297 505 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 VIPR2P41587 438 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 ACADSBP45954 432 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 LIMK1P53667 647 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 ARPP19P56211 112 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 TAS2R40P59535 323 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 OGDHQ02218 1023 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 SRSF5Q13243 272 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 LRRC32Q14392 662 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 CYP1B1Q16678 543 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 BEND6Q5SZJ8 279 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 FAM102AQ5T9C2 384 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 WSCD1Q658N2 575 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 OR6B2Q6IFH4 312 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 DSTYKQ6XUX3 929 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 CCNI2Q6ZMN8 369 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 FAM183BPQ6ZVS7 135 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 POLNQ7Z5Q5 900 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 ELMOD1Q8N336 334 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 EIF1ADQ8N9N8 165 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 C12orf50Q8NA57 414 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 JOSD2Q8TAC2 188 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 ZSCAN18Q8TBC5 510 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 SLC35F5Q8WV83 523 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 E2F7Q96AV8 911 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 ZNF512Q96ME7 567 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 DDX47Q9H0S4 455 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 AFF4Q9UHB7 1163 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-202ENST00000344114 CFAP47Q6ZTR5 3102 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 FAM187AA6NFU0 413 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 HEPACAM2A8MVW5 462 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 CHADO15335 359 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 PDGFRBP09619 1106 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 CCDC130P13994 396 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 DESP17661 470 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 LMO2P25791 158 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 ADORA2BP29275 332 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 HOXA6P31267 233 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 RFC1P35251 1148 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 RPL34P49207 117 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 SLC8A3P57103 927 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 COPS2P61201 443 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 SLC7A5Q01650 507 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 PDE4CQ08493 712 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 FCHO2Q0JRZ9 810 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 TWF1Q12792 350 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 HADHQ16836 314 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 CTXN3Q4LDR2 81 aa14.04□□□□□ -0.16
HERPUD1-202ENST00000344114 AADACL2Q6P093 401 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms