RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RAB20Q9NX57 234 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 TMEM260Q9NX78 707 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 CRNNQ9UBG3 495 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-201ENST00000343524 EBF1Q9UH73 591 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 ITM2BQ9Y287 266 aa8.37□□□□□ -1.07
ATG4A-201ENST00000343524 NAV1Q8NEY1 1877 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 TRPM7Q96QT4 1865 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 MYH14Q7Z406 1995 aaKnown RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 H3BMQ9 156 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 SMIM22K7EJ46 135 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 GMNNO75496 209 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 RSL1D1O76021 490 aaKnown RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 SERPINB2P05120 415 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 KCNA2P16389 499 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 GNL1P36915 607 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 NDST2P52849 883 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 CDKL1Q00532 357 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 CYP4A11Q02928 519 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 ALCAMQ13740 583 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 E2F2Q14209 437 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 CCDC14Q49A88 953 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 GJC2Q5T442 439 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 IRAK1BP1Q5VVH5 260 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 RHPN2Q8IUC4 686 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 GALNT4Q8N4A0 578 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 FIBCD1Q8N539 461 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PACRGLQ8N7B6 248 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PDZD8Q8NEN9 1154 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PDCD6IPQ8WUM4 868 aaKnown RBP8.36□□□□□ -1.07
ATG4A-201ENST00000343524 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 COG8Q96MW5 612 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PCDHB18PQ96TA0 734 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 TMEM79Q9BSE2 394 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 NYXQ9GZU5 481 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 ARMC7Q9H6L4 198 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 RIOX1Q9H6W3 641 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 RMND5AQ9H871 391 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 PNPLA8Q9NP80 782 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 GINM1Q9NU53 330 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 RIC8BQ9NVN3 520 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 DMAC2Q9NW81 257 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 SAGE1Q9NXZ1 904 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 ANKMY1Q9P2S6 941 aa8.36□□□□□ -1.07
ATG4A-201ENST00000343524 A0A0B4J269 797 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GOLGA8MH3BSY2 632 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 STARD3NLO95772 234 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CHEK2O96017 543 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 BPGMP07738 259 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 COX4I1P13073 169 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CCNA2P20248 432 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 OSBPP22059 807 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GRK2P25098 689 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TMBIM6P55061 237 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 OCA2Q04671 838 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TUBB3Q13509 450 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 PDK1Q15118 436 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 DGKDQ16760 1214 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 LSM12Q3MHD2 195 aaKnown RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HSF5Q4G112 596 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 EPC2Q52LR7 807 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF394Q53GI3 561 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 C12orf60Q5U649 245 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SLX4IPQ5VYV7 408 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SH2D5Q6ZV89 423 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 EXOC8Q8IYI6 725 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SLC7A5P1Q8MH63 180 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 LMO3Q8TAP4 145 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 KBTBD7Q8WVZ9 684 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 RASSF5Q8WWW0 418 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SHC3Q92529 594 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HSPH1Q92598 858 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 TMIGD2Q96BF3 282 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SERAC1Q96JX3 654 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 PIGSQ96S52 555 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CSRNP1Q96S65 589 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ZNF347Q96SE7 839 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 KLF6Q99612 283 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 EFHD1Q9BUP0 239 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 RUSC1Q9BVN2 902 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HEMGNQ9BXL5 484 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 COPS7BQ9H9Q2 264 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-201ENST00000343524 CXorf21Q9HAI6 301 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 SLC38A10Q9HBR0 1119 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 ANLNQ9NQW6 1124 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 HOMER2Q9NSB8 354 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
ATG4A-201ENST00000343524 GPRC5DQ9NZD1 345 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms