RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MYH3P11055 1940 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 GSTA4O15217 222 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 VNN1O95497 513 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 THRAP10827 490 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 TSPAN8P19075 237 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 ETFBP38117 255 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 OGDHQ02218 1023 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 MGAT5Q09328 741 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 LRRC38Q5VT99 294 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 SLC39A4Q6P5W5 647 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 C10orf107Q8IVU9 208 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 OSMRQ99650 979 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 FRMD8Q9BZ67 464 aaPredicted RBP12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 ARHGEF38Q9NXL2 777 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 TELO2Q9Y4R8 837 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 AKAP11Q9UKA4 1901 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 E7ENQ6 273 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 MTA2O94776 668 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 PTK2BQ14289 1009 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 CSHL1Q14406 222 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 AGKQ53H12 422 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 ZPBP2Q6X784 338 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 DEFB106AQ8N104 65 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 AGBL3Q8NEM8 1001 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 CLEC4DQ8WXI8 215 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 FIZ1Q96SL8 496 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 XPNPEP3Q9NQH7 507 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 ACKR2O00590 384 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 E2F6O75461 281 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 GOT1P17174 413 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 GRIA1P42261 906 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 MAP3K7CLP57077 242 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 ADIGQ0VDE8 80 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 FAM83AQ86UY5 434 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 METTL23Q86XA0 190 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 EFCAB1Q9HAE3 211 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 NUDT5Q9UKK9 219 aa12.77□□□□□ -0.37
SNRNP48-201ENST00000342415 ATXN1P54253 815 aaKnown RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 UNC5AQ6ZN44 842 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 AFG1LQ8WV93 481 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CD101Q93033 1021 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 NCLNQ969V3 563 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CNDP1Q96KN2 507 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CCDC134Q9H6E4 229 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 LRRC40Q9H9A6 602 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 COQ4Q9Y3A0 265 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CAPN8A6NHC0 703 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ANGPT2O15123 496 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 VAPBO95292 243 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 PIGNO95427 931 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 GRK2P25098 689 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 GPX6P59796 221 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 C6orf10Q5SRN2 563 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 METTL7BQ6UX53 244 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ZC3H3Q8IXZ2 948 aaKnown RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 KYQ8NBH2 561 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 SLC44A1Q8WWI5 657 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 AP5M1Q9H0R1 490 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ARHGAP28Q9P2N2 729 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CICQ96RK0 1608 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ZNF541Q9H0D2 1346 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 GP5P40197 560 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 FAM83EQ2M2I3 478 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 OR6Y1Q8NGX8 325 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 NKD2Q969F2 451 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 PRR11Q96HE9 360 aaPredicted RBP12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 ECSITQ9BQ95 431 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 HAUS8Q9BT25 410 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 CDT1Q9H211 546 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 BAG5Q9UL15 447 aa12.76□□□□□ -0.37
SNRNP48-201ENST00000342415 PTPRJQ12913 1337 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 ADGRA2Q96PE1 1338 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 ATP6AP2A0A1C7CYW4 349 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 TRIM13O60858 407 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 ATP6AP2O75787 350 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 HDAC4P56524 1084 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 STILQ15468 1287 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 DRC3Q9H069 523 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 ZNF358Q9NW07 568 aa12.75□□□□□ -0.37
SNRNP48-201ENST00000342415 PSMC3P17980 439 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms