RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 DCLK1O15075 740 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 CREB3O43889 395 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 MFSD11O43934 449 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 RTN3O95197 1032 aaPredicted RBP17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 GJB5O95377 273 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 IFNB1P01574 187 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 FGBP02675 491 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 ZDHHC11BP0C7U3 371 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 GGCXP38435 758 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 TAF10Q12962 218 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 GPS1Q13098 491 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 CALCOCO2Q13137 446 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 DARS2Q6PI48 645 aaKnown RBP17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 RFX8Q6ZV50 586 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 KRT222Q8N1A0 295 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 NETO2Q8NC67 525 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 FBXO32Q969P5 355 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 LRRC45Q96CN5 670 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 RTP4Q96DX8 246 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 OLFM3Q96PB7 478 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 TTLL2Q9BWV7 592 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 AFF4Q9UHB7 1163 aaKnown RBP17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 ANAPC5Q9UJX4 755 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 NEU3Q9UQ49 428 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 NFS1Q9Y697 457 aa17.76■□□□□ 0.43
FRMD4A-202ENST00000342409 DOCK6Q96HP0 2047 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 BCLAF3A2AJT9 711 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 SLC38A8A6NNN8 435 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 H7C0C1 242 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 EEF2KO00418 725 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 ZFXP17010 805 aaPredicted RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 ATP5OP48047 213 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 RPL10AP62906 217 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 FPGSQ05932 587 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 RNASEH2BQ5TBB1 312 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 ALS2CLQ60I27 953 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 TP53INP2Q8IXH6 220 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 CCDC33Q8N5R6 958 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 COMMD8Q9NX08 183 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 ATP8A1Q9Y2Q0 1164 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 LILRB3O75022 631 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 RBL1P28749 1068 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 HCAR3P49019 387 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 PAFAH1B3Q15102 231 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 CFAP58Q5T655 872 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 SLC39A13Q96H72 371 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 SH3GL2Q99962 352 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 OSBPL2Q9H1P3 480 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 PRDM16Q9HAZ2 1276 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 MTRF1LQ9UGC7 380 aaKnown RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 FARP1Q9Y4F1 1045 aaPredicted RBP17.75■□□□□ 0.43
FRMD4A-202ENST00000342409 KCNU1A8MYU2 1149 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 TBX18O95935 607 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 ERCC2P18074 760 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 NR2C2P49116 596 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 CAV1Q03135 178 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 XRCC4Q13426 336 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 PPP2R5DQ14738 602 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 ARL13BQ3SXY8 428 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 BRMS1LQ5PSV4 323 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 C7orf61Q8IZ16 206 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 ARHGAP18Q8N392 663 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 ZNF461Q8TAF7 563 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 QKIQ96PU8 341 aaKnown RBP eCLIP17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 SEMA4AQ9H3S1 761 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 LRRC4CQ9HCJ2 640 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 CLIC5Q9NZA1 410 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 XPO7Q9UIA9 1087 aaKnown RBP17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 PLAAQ9Y263 795 aa17.74■□□□□ 0.43
FRMD4A-202ENST00000342409 LRIG2O94898 1065 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 RARGP13631 454 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 VAV1P15498 845 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 OAS2P29728 719 aaKnown RBP17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 STIP1P31948 543 aaKnown RBP17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 PMS2P54278 862 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 FAM193AP78312 1265 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 RAB33AQ14088 237 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 ANKRD22Q5VYY1 191 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 TPGS2Q68CL5 300 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 BBOF1Q8ND07 529 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 CPT1BQ92523 772 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 FCRL2Q96LA5 508 aaPredicted RBP17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 OR12D3Q9UGF7 316 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 TPX2Q9ULW0 747 aaKnown RBP17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 CHD5Q8TDI0 1954 aa17.73■□□□□ 0.43
FRMD4A-202ENST00000342409 KCNN4O15554 427 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 RRP9O43818 475 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 PAGE1O75459 146 aa17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 HMGA1P17096 107 aaKnown RBP17.72■□□□□ 0.43
FRMD4A-202ENST00000342409 TPI1P60174 286 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms