RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 MRASO14807 208 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 SIN3BO75182 1162 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 NR1D2Q14995 579 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 TMC7Q7Z402 723 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 DHFR2Q86XF0 187 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 ZBTB18Q99592 522 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 CGRRF1Q99675 332 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 PDE4DIPQ5VU43 2346 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 MYOCOSA0A1B0GUC4 107 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 PTPN7P35236 360 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 EFNA5P52803 228 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 CSHL1Q14406 222 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 NADK2Q4G0N4 442 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 RNASEH2BQ5TBB1 312 aaKnown RBP12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 HPDLQ96IR7 371 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 POMPQ9Y244 141 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
SSX2IP-201ENST00000342203 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 DYTNA2CJ06 578 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CCDC159P0C7I6 412 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 UGP2Q16851 508 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SLC10A5Q5PT55 438 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 FRMD8P1Q9BZ68 369 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 TRNAU1APQ9NX07 287 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MYO1GB0I1T2 1018 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 FASP25445 335 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 UBE3AQ05086 875 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 TAF12Q16514 161 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CARTPTQ16568 116 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 JOSD2Q8TAC2 188 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 ZFAND2BQ8WV99 257 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 ZFYVE19Q96K21 471 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MIPEPQ99797 713 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 ACOT9Q9Y305 439 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 IFT172Q9UG01 1749 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CYP3A7-CYP3A51PA0A087WV96 503 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 EEF2KO00418 725 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SNX2O60749 519 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 FDX1P10109 184 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CYP3A7P24462 503 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 GTF2A2P52657 109 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SFSWAPQ12872 951 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 FASTKQ14296 549 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 LDLRAP1Q5SW96 308 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 PARP8Q8N3A8 854 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 BANPQ8N9N5 519 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 PANX3Q96QZ0 392 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SORCS3Q9UPU3 1222 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 AGRPO00253 132 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 BAIAP3O94812 1187 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 GDF10P55107 478 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MTX3Q5HYI7 312 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 TDRD10Q5VZ19 366 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MAP4K3Q8IVH8 894 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 NPAS2Q99743 824 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 NMRAL1Q9HBL8 299 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 GGA3Q9NZ52 723 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CROTQ9UKG9 612 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 ATP6AP2A0A1C7CYW4 349 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 ATP6AP2O75787 350 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 KLF10Q13118 480 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 CROCCP3Q8IVE0 287 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 PTTG2Q9NZH5 202 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
SSX2IP-201ENST00000342203 MFN2O95140 757 aa12.83□□□□□ -0.36
SSX2IP-201ENST00000342203 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
SSX2IP-201ENST00000342203 NR4A1P22736 598 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms