RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 MRPL1Q9BYD6 325 aaKnown RBP12.54□□□□□ -0.4
TMEM220-201ENST00000341871 CEP41Q9BYV8 373 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 GBA3Q9H227 469 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 UBN1Q9NPG3 1134 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 SNTG2Q9NY99 539 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 MCF2LO15068 1137 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 TEX28O15482 410 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
TMEM220-201ENST00000341871 LIASO43766 372 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 LRCH4O75427 683 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 TRMUO75648 421 aaKnown RBP12.54□□□□□ -0.4
TMEM220-201ENST00000341871 MICAL2O94851 1124 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 ZBED1O96006 694 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 CALB1P05937 261 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 GJA5P36382 358 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 GRIA2P42262 883 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 RUNDC3BQ96NL0 473 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 MAK16Q9BXY0 300 aaKnown RBP12.54□□□□□ -0.4
TMEM220-201ENST00000341871 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 STX18Q9P2W9 335 aaKnown RBP12.54□□□□□ -0.4
TMEM220-201ENST00000341871 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
TMEM220-201ENST00000341871 MCM3APO60318 1980 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 ADAM23O75077 832 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 OSBPP22059 807 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 STT3AP46977 705 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 MBTD1Q05BQ5 628 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PTK6Q13882 451 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CLUL1Q15846 466 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PHF13Q86YI8 300 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 FAM167AQ96KS9 214 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CADM1Q9BY67 442 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PAIP1Q9H074 479 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 IFT122Q9HBG6 1241 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 VPS51Q9UID3 782 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 IGKV6D-21A0A0A0MT36 114 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 A0A0G2JLL6 359 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 GOLGA8TH3BQL2 631 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 H3BRB1 525 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PMM2O15305 246 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CCDC22O60826 627 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CIB2O75838 187 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 LCP1P13796 627 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 MIPP30301 263 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PGM1P36871 562 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 KLF1Q13351 362 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 IYDQ6PHW0 289 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 DARS2Q6PI48 645 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PRRT2Q7Z6L0 340 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CTAGE3PQ8IX95 158 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 EXD1Q8NHP7 514 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 TMEM134Q9H6X4 195 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 MAD1L1Q9Y6D9 718 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 STRNO43815 780 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 FAM189A1O60320 539 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 PCSK6P29122 969 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 EPHX2P34913 555 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
TMEM220-201ENST00000341871 KRT81Q14533 505 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 NR1D2Q14995 579 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CCNG2Q16589 344 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 GRAMD1BQ3KR37 738 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 UTS2BQ765I0 119 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 ARFGAP1Q8N6T3 406 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 CLEC4CQ8WTT0 213 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 COX4I2Q96KJ9 171 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 WHRNQ9P202 907 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 GIT1Q9Y2X7 761 aa12.53□□□□□ -0.4
TMEM220-201ENST00000341871 KANSL1LA0AUZ9 987 aa12.52□□□□□ -0.4
TMEM220-201ENST00000341871 PDHXO00330 501 aa12.52□□□□□ -0.4
TMEM220-201ENST00000341871 TGFB3P10600 412 aa12.52□□□□□ -0.4
TMEM220-201ENST00000341871 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.4
TMEM220-201ENST00000341871 TFE3P19532 575 aaPredicted RBP12.52□□□□□ -0.4
TMEM220-201ENST00000341871 CA4P22748 312 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms