RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 CCP110O43303 1012 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 GPD1P21695 349 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 SLC6A4P31645 630 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 GBP1P32455 592 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 GALCP54803 685 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 SEC13P55735 322 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 SLC18A3Q16572 532 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 SCYL2Q6P3W7 929 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 CHSY1Q86X52 802 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 FAM172AQ8WUF8 416 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 FAM3CQ92520 227 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 DNASE1L2Q92874 299 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 NPY6RQ99463 290 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 MAGEB5Q9BZ81 275 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 TKTL2Q9H0I9 626 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 FBRSL1Q9HCM7 1045 aaKnown RBP13.72□□□□□ -0.21
TUBD1-202ENST00000340993 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 TBC1D14Q9P2M4 693 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 WNT16Q9UBV4 365 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 DMDP11532 3685 aa13.72□□□□□ -0.21
TUBD1-202ENST00000340993 ANKRD62A6NC57 917 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 C2CD4BA6NLJ0 364 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 PI15O43692 258 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 ADH1CP00326 375 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 IGLV3-25P01717 112 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 GZMAP12544 262 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 TYRP14679 529 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 TCF3P15923 654 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 PSMA2P25787 234 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
TUBD1-202ENST00000340993 CDC25BP30305 580 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 ASTE1Q2TB18 679 aaPredicted RBP13.71□□□□□ -0.21
TUBD1-202ENST00000340993 SLC25A52Q3SY17 297 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 SMYD5Q6GMV2 418 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.21
TUBD1-202ENST00000340993 ZNF276Q8N554 614 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 DDX23Q9BUQ8 820 aaKnown RBP13.71□□□□□ -0.21
TUBD1-202ENST00000340993 NUP85Q9BW27 656 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 ISCUQ9H1K1 167 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 PARVAQ9NVD7 372 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.21
TUBD1-202ENST00000340993 TCRBV5S1A1TA0A578 114 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 SHISA7A6NL88 538 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 FAM170BA6NMN3 283 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 ACSL4O60488 711 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 IGLV3-27P01718 113 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 SLC11A2P49281 568 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 FAM133BQ5BKY9 247 aaKnown RBP13.71□□□□□ -0.22
TUBD1-202ENST00000340993 NUGGCQ68CJ6 796 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 CWF19L1Q69YN2 538 aaKnown RBP13.71□□□□□ -0.22
TUBD1-202ENST00000340993 ZNF852Q6ZMS4 543 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 LGI2Q8N0V4 545 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 SLC39A13Q96H72 371 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 DCLK3Q9C098 648 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 WDCPQ9H6R7 721 aa13.71□□□□□ -0.22
TUBD1-202ENST00000340993 DNAJC17Q9NVM6 304 aaKnown RBP13.71□□□□□ -0.22
TUBD1-202ENST00000340993 USP34Q70CQ2 3546 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 VPS13AQ96RL7 3174 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 SSU72P8A0A1W2PR75 194 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 GOLGA6L6A8MZA4 724 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 I6L893 689 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-202ENST00000340993 TBL1XO60907 577 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 PAGE1O75459 146 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 EGFP01133 1207 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 CCR1P32246 355 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 RDXP35241 583 aaKnown RBP13.7□□□□□ -0.22
TUBD1-202ENST00000340993 GJC1P36383 396 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
TUBD1-202ENST00000340993 GALK1P51570 392 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
TUBD1-202ENST00000340993 NR1H3Q13133 447 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 GAB4Q2WGN9 574 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 PIK3R6Q5UE93 754 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 CPNE8Q86YQ8 564 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 CCDC185Q8N715 623 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 ACRBPQ8NEB7 543 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 DESI2Q9BSY9 194 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-202ENST00000340993 GPATCH2LQ9NWQ4 482 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 CTTNBP2NLQ9P2B4 639 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 ANAPC7Q9UJX3 599 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
TUBD1-202ENST00000340993 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 KANSL1LA0AUZ9 987 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 SCNN1AP37088 669 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 IRAK1P51617 712 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 HDAC4P56524 1084 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 ADGRF1Q5T601 910 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 PLEKHA7Q6IQ23 1121 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 RAD9BQ6WBX8 426 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms