RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.95■□□□□ 0.78
SYNE4-202ENST00000340477 COX16Q9P0S2 106 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 IFNKQ9P0W0 207 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 STOML2Q9UJZ1 356 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 PAXBP1Q9Y5B6 917 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 ATG2BQ96BY7 2078 aa19.95■□□□□ 0.78
SYNE4-202ENST00000340477 CALB1P05937 261 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 CHRNB2P17787 502 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 ABCB4P21439 1286 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 MATKP42679 507 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 MRPS21P82921 87 aaKnown RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 E2F5Q15329 346 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 HSF5Q4G112 596 aaPredicted RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 C2orf27AQ580R0 203 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 FYB2Q5VWT5 728 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 CCDC117Q8IWD4 279 aaPredicted RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 ZNF557Q8N988 423 aaPredicted RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 ATRIPQ8WXE1 791 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 BAP1Q92560 729 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 TMA16Q96EY4 203 aaKnown RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 FCRL2Q96LA5 508 aaPredicted RBP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 C11orf70Q9BRQ4 267 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 SLC2A11Q9BYW1 496 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.94■□□□□ 0.78
SYNE4-202ENST00000340477 PCDHGA2Q9Y5H1 932 aa19.94■□□□□ 0.78
SYNE4-202ENST00000340477 FAM170AA1A519 330 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 K7EQS6 105 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 TSPAN3O60637 253 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 IGLV3-25P01717 112 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 TNFAIP3P21580 790 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 MMP8P22894 467 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 CCR1P32246 355 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 SULT1E1P49888 294 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 CENPCQ03188 943 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 NME3Q13232 169 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 CLEC16AQ2KHT3 1053 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 TSSK4Q6SA08 328 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 MAML2Q8IZL2 1156 aaPredicted RBP19.93■□□□□ 0.78
SYNE4-202ENST00000340477 HJURPQ8NCD3 748 aaPredicted RBP19.93■□□□□ 0.78
SYNE4-202ENST00000340477 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 SLC39A13Q96H72 371 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 BTN2A3PQ96KV6 586 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 ZSCAN32Q9NX65 697 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 ADAM22Q9P0K1 906 aa19.93■□□□□ 0.78
SYNE4-202ENST00000340477 A0A0A0MRY4 1105 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 A0A1W2PQJ5 194 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 M0QYT0 321 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 NBL1P41271 181 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 ZC3H12AQ5D1E8 599 aaKnown RBP19.92■□□□□ 0.78
SYNE4-202ENST00000340477 SYT13Q7L8C5 426 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 ANKS1BQ7Z6G8 1248 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 CHSY1Q86X52 802 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 PHTF2Q8N3S3 785 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 RNF214Q8ND24 703 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 SLC30A5Q8TAD4 765 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 KCNV2Q8TDN2 545 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 UCMAQ8WVF2 138 aa19.92■□□□□ 0.78
SYNE4-202ENST00000340477 EZH1Q92800 747 aaPredicted RBP19.92■□□□□ 0.78
SYNE4-202ENST00000340477 ANKRD62A6NC57 917 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 F9P00740 461 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 UNGP13051 313 aaPredicted RBP19.91■□□□□ 0.78
SYNE4-202ENST00000340477 TIE1P35590 1138 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 KLHL30Q0D2K2 578 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 C2CD6Q53TS8 623 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 EOGTQ5NDL2 527 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 SDE2Q6IQ49 451 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 PKN3Q6P5Z2 889 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 IRF2BP2Q7Z5L9 587 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 ZNF513Q8N8E2 541 aaPredicted RBP19.91■□□□□ 0.78
SYNE4-202ENST00000340477 XPO4Q9C0E2 1151 aaKnown RBP19.91■□□□□ 0.78
SYNE4-202ENST00000340477 TTYH3Q9C0H2 523 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 SEMA4AQ9H3S1 761 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 METTL5Q9NRN9 209 aaKnown RBP19.91■□□□□ 0.78
SYNE4-202ENST00000340477 AIPL1Q9NZN9 384 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 MMP17Q9ULZ9 603 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 SLC27A6Q9Y2P4 619 aa19.91■□□□□ 0.78
SYNE4-202ENST00000340477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYNE4-202ENST00000340477 FANCMQ8IYD8 2048 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 KCNU1A8MYU2 1149 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 F5H5T6 163 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 TBL1XO60907 577 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 KLF8O95600 359 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 TPM1P09493 284 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 DESP17661 470 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 PBX1P40424 430 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 PITX1P78337 314 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 DEUP1Q05D60 604 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 DMC1Q14565 340 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 SLC25A52Q3SY17 297 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 TDRD12Q587J7 1177 aaKnown RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 FAM133BQ5BKY9 247 aaKnown RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 MPP7Q5T2T1 576 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 RFWD3Q6PCD5 774 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 ARCQ7LC44 396 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 VPS36Q86VN1 386 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 PHF13Q86YI8 300 aaPredicted RBP19.9■□□□□ 0.78
SYNE4-202ENST00000340477 CAMKK1Q8N5S9 505 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 PCDHB18PQ96TA0 734 aa19.9■□□□□ 0.78
SYNE4-202ENST00000340477 SELENOOQ9BVL4 669 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms