RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ATP6V0D2Q8N8Y2 350 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 ACSF2Q96CM8 615 aaPredicted RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 NECTIN4Q96NY8 510 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 TLR10Q9BXR5 811 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 TMPRSS4Q9NRS4 437 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 MRFAP1Q9Y605 127 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 RIOK3O14730 519 aaKnown RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 OLFM2O95897 454 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 RARAP10276 462 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 RING1Q06587 406 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 EIF4EBP2Q13542 120 aaPredicted RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 EFHC2Q5JST6 749 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 NUGGCQ68CJ6 796 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 TXNRD3NBQ6F5E7 133 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 DENND1CQ8IV53 801 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 KRT35Q92764 455 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 PLD4Q96BZ4 506 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 HES6Q96HZ4 224 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 PSMB7Q99436 277 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 GDE1Q9NZC3 331 aa15.31■□□□□ 0.04
CSRP1-201ENST00000340006 USP15Q9Y4E8 981 aaPredicted RBP15.31■□□□□ 0.04
CSRP1-201ENST00000340006 KCNU1A8MYU2 1149 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 PSTPIP1O43586 416 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 STC2O76061 302 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 RWDD2BP57060 319 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
CSRP1-201ENST00000340006 NPAS3Q8IXF0 933 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 SLC39A13Q96H72 371 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 FCRL2Q96LA5 508 aaPredicted RBP15.3■□□□□ 0.04
CSRP1-201ENST00000340006 POMKQ9H5K3 350 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSRP1-201ENST00000340006 KLHL11Q9NVR0 708 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 GPATCH2LQ9NWQ4 482 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 DDX56Q9NY93 547 aaKnown RBP15.3■□□□□ 0.04
CSRP1-201ENST00000340006 CFAP97Q9P2B7 532 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 LSM7Q9UK45 103 aaKnown RBP15.3■□□□□ 0.04
CSRP1-201ENST00000340006 CDH7Q9ULB5 785 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 FZD10Q9ULW2 581 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 SNX12Q9UMY4 172 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 AP4E1Q9UPM8 1137 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
CSRP1-201ENST00000340006 LEFTY2O00292 366 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 PAGE1O75459 146 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CORO1AP31146 461 aaKnown RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CTNNA1P35221 906 aaKnown RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SLC11A2P49281 568 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 AIF1P55008 147 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ZXDBP98169 803 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 TUBB2AQ13885 445 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 KRT81Q14533 505 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 LRRC38Q5VT99 294 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 MAP7D3Q8IWC1 876 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CD101Q93033 1021 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 BTN2A3PQ96KV6 586 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SNRNP25Q9BV90 132 aaKnown RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 TUBB2BQ9BVA1 445 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 MAGEB5Q9BZ81 275 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 DCLK3Q9C098 648 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CDC23Q9UJX2 597 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ARHGAP26Q9UNA1 814 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 KCNK3O14649 394 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 SP100P23497 879 aaPredicted RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CTNNA2P26232 953 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 CXCR5P32302 372 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 FAM78AQ5JUQ0 283 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 POTEHQ6S545 545 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 DDX42Q86XP3 938 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ST13P5Q8NFI4 369 aaPredicted RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 RNF25Q96BH1 459 aaPredicted RBP15.29■□□□□ 0.04
CSRP1-201ENST00000340006 HAPLN3Q96S86 360 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 ANLNQ9NQW6 1124 aa15.29■□□□□ 0.04
CSRP1-201ENST00000340006 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 PI4K2BG5E9Z4 385 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 CREB3O43889 395 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 IGLV3-27P01718 113 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 KRT1P04264 644 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 PRLRP16471 622 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 CETN2P41208 172 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 VIPR2P41587 438 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 PEX5P50542 639 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 CDH6P55285 790 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 MTA1Q13330 715 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
CSRP1-201ENST00000340006 PYROXD2Q8N2H3 581 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms