RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ETV4P43268 484 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 ZBTB6Q15916 424 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 TRIM71Q2Q1W2 868 aaKnown RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 TWF2Q6IBS0 349 aaKnown RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 SLC26A11Q86WA9 606 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 PYROXD2Q8N2H3 581 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 RAB3IPQ96QF0 476 aaPredicted RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 AGO3Q9H9G7 860 aaKnown RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 PLEKHA5Q9HAU0 1116 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 C2orf71A6NGG8 1288 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 C2CD2LO14523 706 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 SPAG6O75602 509 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 SETSIPP0DME0 302 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 SLC18A2Q05940 514 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 UBXN11Q5T124 520 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 TTC39BQ5VTQ0 682 aaPredicted RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 SLC7A6OSQ96CW6 309 aaPredicted RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 KCTD15Q96SI1 283 aaPredicted RBP16.86■□□□□ 0.29
LITAF-201ENST00000339430 LRMDAQ9H2I8 198 aa16.86■□□□□ 0.29
LITAF-201ENST00000339430 COPEO14579 308 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SPTLC1O15269 473 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 ANP32DO95626 131 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 AMPD1P23109 780 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 TRMT10BQ6PF06 316 aaKnown RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 KCNT2Q6UVM3 1135 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 UNC5AQ6ZN44 842 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 PLCD3Q8N3E9 789 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SLC2A14Q8TDB8 520 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SRPK1Q96SB4 655 aaKnown RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 MECRQ9BV79 373 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SLC13A1Q9BZW2 595 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 IQCGQ9H095 443 aaKnown RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 FAM124BQ9H5Z6 455 aaPredicted RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 OGDHLQ9ULD0 1010 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 ATP5HO75947 161 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 DHRS4L1P0CG22 281 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 CSH1P0DML2 217 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 CSH2P0DML3 217 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 GOT1P17174 413 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 EPHB2P29323 1055 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 BST2Q10589 180 aaKnown RBP16.85■□□□□ 0.29
LITAF-201ENST00000339430 DPYSL2Q16555 572 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 SLC45A4Q5BKX6 768 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 ZNF534Q76KX8 674 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 LRRC52Q8N7C0 313 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 GPATCH11Q8N954 259 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 TRIM55Q9BYV6 548 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 PNPLA8Q9NP80 782 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 MTMR10Q9NXD2 777 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 HEY2Q9UBP5 337 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 DERAQ9Y315 318 aa16.85■□□□□ 0.29
LITAF-201ENST00000339430 CD52P31358 61 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 LBX1P52954 281 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 FBXO47Q5MNV8 452 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 CLNKQ7Z7G1 428 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 FAM131BQ86XD5 332 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 CSPG4P5Q96PW8 444 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 TBC1D10AQ9BXI6 508 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 TMPRSS4Q9NRS4 437 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 PIH1D1Q9NWS0 290 aaKnown RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 PDCD11Q14690 1871 aaKnown RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 GPR182O15218 404 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 APOEP02649 317 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 SNRPAP09012 282 aaKnown RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 CKBP12277 381 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 PTPN9P43378 593 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 SERPINB4P48594 390 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 BCAT1P54687 386 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 LPIN1Q14693 890 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 PRKD1Q15139 912 aaPredicted RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 ARHGAP17Q68EM7 881 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 LONP2Q86WA8 852 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 UNC93AQ86WB7 457 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 ZDHHC17Q8IUH5 632 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 ANKRD52Q8NB46 1076 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 GIMAP7Q8NHV1 300 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 TACO1Q9BSH4 297 aaKnown RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 C11orf84Q9BUA3 381 aaPredicted RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 FBXO6Q9NRD1 293 aaPredicted RBP16.84■□□□□ 0.29
LITAF-201ENST00000339430 PADI3Q9ULW8 664 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 IPPQ9Y573 584 aa16.84■□□□□ 0.29
LITAF-201ENST00000339430 KPNA7A9QM74 516 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 KRT37O76014 449 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 CCND1P24385 295 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 ARFIP2P53365 341 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 SNX16P57768 344 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 SMAD1Q15797 465 aaKnown RBP16.83■□□□□ 0.28
LITAF-201ENST00000339430 NCBP2-AS2Q69YL0 99 aa16.83■□□□□ 0.28
LITAF-201ENST00000339430 HEATR6Q6AI08 1181 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms