RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMEM109Q9BVC6 243 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 C12orf65Q9H3J6 166 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PRDM12Q9H4Q4 367 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PLAC1Q9HBJ0 212 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 DMAP1Q9NPF5 467 aaPredicted RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 EURLQ9NYK6 297 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SEPT10Q9P0V9 454 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 FBXW11Q9UKB1 542 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 STAP1Q9ULZ2 295 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SQORQ9Y6N5 450 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TSC2P49815 1807 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 EXOC1LA0A1B0GW35 172 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 BCLAF3A2AJT9 711 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SPAG7O75391 227 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 ERCC2P18074 760 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 ARL4AP40617 200 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TMED2Q15363 201 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PKN2Q16513 984 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC45A4Q5BKX6 768 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 VARS2Q5ST30 1063 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 MFSD5Q6N075 450 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 DENND5BQ6ZUT9 1274 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 RFX8Q6ZV50 586 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CENPUQ71F23 418 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SCD5Q86SK9 330 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PRPF39Q86UA1 669 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SPATA2LQ8IUW3 424 aaPredicted RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 DIS3LQ8TF46 1054 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CELF6Q96J87 481 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SERPINB12Q96P63 405 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 OLFM3Q96PB7 478 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PRMT1Q99873 361 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 WDCPQ9H6R7 721 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 OR12D3Q9UGF7 316 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 RABGEF1Q9UJ41 708 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PCDHB7Q9Y5E2 793 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 VWA8A3KMH1 1905 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 TMEM120BA0PK00 339 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 DGKIO75912 1065 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 FAM155BO75949 473 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 LRIG2O94898 1065 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 AGTP01019 485 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 RPL17P18621 184 aaKnown RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 SLC11A1P49279 550 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 MNX1P50219 401 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 TSPY1Q01534 308 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 DPYSQ14117 519 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 SPARCL1Q14515 664 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 CRIPAKQ8N1N5 446 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 THEM5Q8N1Q8 247 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 ANKRD42Q8N9B4 389 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 DQX1Q8TE96 717 aaKnown RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 FBF1Q8TES7 1133 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 MAML1Q92585 1016 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 CASP10Q92851 521 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 VWCEQ96DN2 955 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 P2RY11Q96G91 374 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 FAM193BQ96PV7 902 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 CCT8L2Q96SF2 557 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 FRMD8P1Q9BZ68 369 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 ROPN1BQ9BZX4 212 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 TSPYL1Q9H0U9 437 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 EPN3Q9H201 632 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 ROPN1Q9HAT0 212 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 KCNK9Q9NPC2 374 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 PAK6Q9NQU5 681 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 NDFIP2Q9NV92 336 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 MARCH5Q9NX47 278 aa7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 ZMYND8Q9ULU4 1186 aaPredicted RBP7.65□□□□□ -1.19
SRFBP1-201ENST00000339397 CHD9Q3L8U1 2897 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 A0A1W2PQH9 124 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 EEF2KO00418 725 aaKnown RBP7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 NDUFAB1O14561 156 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 DCLK1O15075 740 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 INPPL1O15357 1258 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 ADAM12O43184 909 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 FBXO21O94952 628 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 VNN2O95498 520 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 SKIP12755 728 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 DESP17661 470 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 ARL4CP56559 192 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 SEMA3BQ13214 749 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 RTP2Q5QGT7 225 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 PRSS55Q6UWB4 352 aaPredicted RBP7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 ARHGAP36Q6ZRI8 547 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 ZNF534Q76KX8 674 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 C4orf33Q8N1A6 199 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 PLCD3Q8N3E9 789 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 ATXN2LQ8WWM7 1075 aaKnown RBP7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 HTR3CQ8WXA8 447 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 RNF34Q969K3 372 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 RTP4Q96DX8 246 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 KLF6Q99612 283 aaPredicted RBP7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 TMEM161AQ9NX61 479 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 PCDHB8Q9UN66 801 aa7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 CXorf49A8MYA2 514 aaPredicted RBP7.64□□□□□ -1.19
SRFBP1-201ENST00000339397 RASA4BC9J798 803 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms