RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CA9Q16790 459 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 LACTB2Q53H82 288 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CHST9Q7L1S5 443 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TADA2BQ86TJ2 420 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 PHOSPHO2Q8TCD6 241 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SIGLEC10Q96LC7 697 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 GLT1D1Q96MS3 346 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 SNX25Q9H3E2 840 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CDC42EP4Q9H3Q1 356 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NOL6Q9H6R4 1146 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ADAM21Q9UKJ8 722 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 HES2Q9Y543 173 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 A8MXQ7 604 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 H7C4K7 107 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ZBED1O96006 694 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CSNK1DP48730 415 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 MRPL19P49406 292 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 KPNA1P52294 538 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ITGA8P53708 1063 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 GDF10P55107 478 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 OTUD4Q01804 1114 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 RAB33AQ14088 237 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NFE2Q16621 373 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 WDR78Q5VTH9 848 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NUGGCQ68CJ6 796 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 MAP7D3Q8IWC1 876 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 CCDC185Q8N715 623 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 GLIS1Q8NBF1 620 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 GRIN3AQ8TCU5 1115 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ARNTL2Q8WYA1 636 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 OXNAD1Q96HP4 312 aaPredicted RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ZFP42Q96MM3 310 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 ADAM2Q99965 735 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 UBE2OQ9C0C9 1292 aaKnown RBP5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 LRRC4CQ9HCJ2 640 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 TRPC7Q9HCX4 862 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.521e-7■□□□□ 9.1
PRPF4B-201ENST00000337659 ADAM28Q9UKQ2 775 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 PLAAQ9Y263 795 aa5.56□□□□□ -1.52
PRPF4B-201ENST00000337659 C2orf16Q68DN1 1984 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 A0A0A0MRY4 1105 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PAPSS2O95340 614 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TIMP1P01033 207 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 KRT14P02533 472 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 LTFP02788 710 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ATP5BP06576 529 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ETV4P43268 484 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SLC7A5Q01650 507 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ZNF211Q13398 564 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 RAB6CQ53S08 254 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 FAM102AQ5T9C2 384 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TTC39BQ5VTQ0 682 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PPP1R21Q6ZMI0 780 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 RNF165Q6ZSG1 346 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TMEM135Q86UB9 458 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TCEAL8Q8IYN2 117 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 DCP1BQ8IZD4 617 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PDZD8Q8NEN9 1154 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SPATA13Q96N96 652 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 GAD1Q99259 594 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PAAF1Q9BRP4 392 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 RAB6CQ9H0N0 254 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 GBA3Q9H227 469 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 FBXO44Q9H4M3 255 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.55□□□□□ -1.526e-7■□□□□ 10.2
PRPF4B-201ENST00000337659 KMT2EQ8IZD2 1858 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MYBPHLA2RUH7 354 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 APOL1O14791 398 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PSMD3O43242 534 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TMEM63AO94886 807 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CPP00450 1065 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 GALTP07902 379 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CCL5P13501 91 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ALOX15P16050 662 aaPredicted RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PDGFRAP16234 1089 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 HMGA1P17096 107 aaKnown RBP5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SDC4P31431 198 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PARP6Q2NL67 630 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CCDC38Q502W7 563 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SH3PXD2AQ5TCZ1 1133 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 RFX8Q6ZV50 586 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CLEC14AQ86T13 490 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 MON1AQ86VX9 555 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 SEPT8Q92599 483 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 P3H4Q92791 437 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CFAP57Q96MR6 1250 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TCHPQ9BT92 498 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ZBP1Q9H171 429 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 KCNH6Q9H252 994 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 STAP1Q9ULZ2 295 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 AP4E1Q9UPM8 1137 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ELNP15502 786 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 CD58P19256 250 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 THPOP40225 353 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 PLK1P53350 603 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 TAF5Q15542 800 aa5.55□□□□□ -1.52
PRPF4B-201ENST00000337659 ATP13A4Q4VNC1 1196 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms