RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CD3EAPO15446 510 aaKnown RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 CHN1P15882 459 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 HK2P52789 917 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 RAD23AP54725 363 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 FOXD4Q12950 439 aaPredicted RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 TERF2Q15554 542 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 FBXO16Q8IX29 292 aaPredicted RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 NMRAL1Q9HBL8 299 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 MRPL17Q9NRX2 175 aaKnown RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 NDUFS2O75306 463 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 EFEMP1Q12805 493 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 MFSD10Q14728 455 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 PEX5LQ8IYB4 626 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 SYTL1Q8IYJ3 562 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 RNF103O00237 685 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 WWP2O00308 870 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 USP1O94782 785 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 NEK5Q6P3R8 708 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 NDUFB5O43674 189 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 CHKAP35790 457 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 CPNE1Q99829 537 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 MRPS26Q9BYN8 205 aaKnown RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 ENTPD4Q9Y227 616 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 A0A087X1B8 175 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 PQBP1O60828 265 aaKnown RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 ERBB2P04626 1255 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 ADORA2AP29274 412 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 CDC16Q13042 620 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 MPP3Q13368 585 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 SGO1Q5FBB7 561 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 TUBGCP3Q96CW5 907 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 TMEM120BA0PK00 339 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 GCNT1Q02742 428 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 PGM5Q15124 567 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 CHI3L2Q15782 390 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 ZFP1Q6P2D0 407 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 PAGE2Q7Z2X7 111 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 SPATA5L1Q9BVQ7 753 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 TRDMT1O14717 391 aaKnown RBP12.57□□□□□ -0.4
FN1-202ENST00000336916 ANXA6P08133 673 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 FAM46CQ5VWP2 391 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 FAM172AQ8WUF8 416 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
FN1-202ENST00000336916 F8VZ95 297 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 CCT8L2Q96SF2 557 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 ACKR2O00590 384 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 CLTBP09497 229 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 LSP1P33241 339 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MDH1BQ5I0G3 518 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 DNMT3LQ9UJW3 386 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 A0A087WWV3 80 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 AIM2O14862 343 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MAGEC1O60732 1142 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 PDHA1P08559 390 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 TLX1P31314 330 aaPredicted RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 STRA8Q7Z7C7 330 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 TMEM132CQ8N3T6 1108 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 HNRNPLLQ8WVV9 542 aaKnown RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 CHP1Q99653 195 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 KLHL20Q9Y2M5 609 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 NCK2O43639 380 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 ZKSCAN4Q969J2 545 aaPredicted RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 MS4A14Q96JA4 679 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MLXIPLQ9NP71 852 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MFHAS1Q9Y4C4 1052 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 FYNP06241 537 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 FAM45BPQ6NSW5 357 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 TAAR1Q96RJ0 339 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 OMDQ99983 421 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 SYT15Q9BQS2 421 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 RARGP13631 454 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 SERPINB1P30740 379 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 SLC16A1P53985 500 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 RAB14P61106 215 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 TSNQ15631 228 aaKnown RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 KLHL35Q6PF15 583 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 C18orf25Q96B23 403 aaPredicted RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 DNAJC1Q96KC8 554 aaKnown RBP12.56□□□□□ -0.4
FN1-202ENST00000336916 OSGEPL1Q9H4B0 414 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 ACOT9Q9Y305 439 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 NFASCO94856 1347 aa12.56□□□□□ -0.4
FN1-202ENST00000336916 VTNP04004 478 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 GYPCP04921 128 aa12.55□□□□□ -0.4
FN1-202ENST00000336916 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms