RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ROPN1BQ9BZX4 212 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 ROPN1Q9HAT0 212 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 RBM22Q9NW64 420 aaKnown RBP eCLIP9.59□□□□□ -0.876e-9■□□□□ 11
FNDC3B-201ENST00000336824 SEPT3Q9UH03 358 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 VANGL2Q9ULK5 521 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 EPHB6O15197 1021 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 HSPA8P11142 646 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 SAMD11Q96NU1 681 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 RAB3IPQ96QF0 476 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 PPARDQ03181 441 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 MMEL1Q495T6 779 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 ANKRD20A8PQ5CZ79 823 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 ARHGAP17Q68EM7 881 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 CCNI2Q6ZMN8 369 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 HTR3CQ8WXA8 447 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 MINDY3Q9H8M7 445 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 HSPA4LO95757 839 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.876e-7■□□□□ 8.3
FNDC3B-201ENST00000336824 WDR75Q8IWA0 830 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 GSPT2Q8IYD1 628 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 TMEM121Q9BTD3 319 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 TBC1D14Q9P2M4 693 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 SMG5Q9UPR3 1016 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 JCHAINP01591 159 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 MAPK8P45983 427 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 LPIN1Q14693 890 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 PTRHD1Q6GMV3 140 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 NLRP9Q7RTR0 991 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 CCDC197Q8NCU1 140 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 BCAS4Q8TDM0 211 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 FNIP1Q8TF40 1166 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 EXT2Q93063 718 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 EML4Q9HC35 981 aaKnown RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 TAS2R14Q9NYV8 317 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 EIF3HO15372 352 aaKnown RBP eCLIP9.59□□□□□ -0.873e-7■□□□□ 9.8
FNDC3B-201ENST00000336824 ADH1CP00326 375 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 TMPRSS15P98073 1019 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 MAP3K21Q5TCX8 1036 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 SLC39A5Q6ZMH5 540 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 EGFL8Q99944 293 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 RGS18Q9NS28 235 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 UBA2Q9UBT2 640 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 CHMP2BQ9UQN3 213 aa9.59□□□□□ -0.87
FNDC3B-201ENST00000336824 PYGMP11217 842 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TTC17Q96AE7 1141 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 PCED1BQ96HM7 432 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 SLC9A7Q96T83 725 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ELAC1Q9H777 363 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ASB3Q9Y575 518 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ACRP10323 421 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ATP4AP20648 1035 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 GABRR2P28476 465 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TTLL9Q3SXZ7 439 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TTC39BQ5VTQ0 682 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ERAP2Q6P179 960 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 KCNT2Q6UVM3 1135 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 PSTKQ8IV42 348 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ATG4AQ8WYN0 398 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ULK4Q96C45 1275 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TUBB6Q9BUF5 446 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ACP6Q9NPH0 428 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 NOL4O94818 638 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 CST5P28325 142 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 VSNL1P62760 191 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 PPP1R15BQ5SWA1 713 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 SLC4A11Q8NBS3 891 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 BLOC1S5Q8TDH9 187 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ARHGEF2Q92974 986 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 SMARCAL1Q9NZC9 954 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 SHOC2Q9UQ13 582 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 WEE1P30291 646 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 C15orf59Q2T9L4 293 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ZC3H12AQ5D1E8 599 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 COLGALT1Q8NBJ5 622 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ZNF669Q96BR6 464 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 CRLS1Q9UJA2 301 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 MAGOHP61326 146 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 ZRANB3Q5FWF4 1079 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 L1RE1Q9UN81 338 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 NRP1O14786 923 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TSPAN3O60637 253 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 AGTP01019 485 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 AMPD1P23109 780 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TKTP29401 623 aaKnown RBP9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 GGCXP38435 758 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 SLC5A3P53794 718 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TBC1D19Q8N5T2 526 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 LEMD2Q8NC56 503 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 TEKT4Q8WW24 435 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 BTN2A3PQ96KV6 586 aa9.58□□□□□ -0.88
FNDC3B-201ENST00000336824 PSME4Q14997 1843 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms