RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 ZC3H12AQ5D1E8 599 aaKnown RBP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 FSTL4Q6MZW2 842 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 ZNF571Q7Z3V5 609 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 CCDC117Q8IWD4 279 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 FAM217AQ8IXS0 508 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 BTN2A3PQ96KV6 586 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 FCRL2Q96LA5 508 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 CHRDQ9H2X0 955 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 DNAJC17Q9NVM6 304 aaKnown RBP16.42■□□□□ 0.22
MRPL55-202ENST00000336300 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 CACNG3O60359 315 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 TULP3O75386 442 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 KAT7O95251 611 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 MOCS2O96007 188 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 EGFP01133 1207 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 IGLV3-25P01717 112 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 TNFRSF4P43489 277 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 SLC6A11P48066 632 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 SULT1E1P49888 294 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 PTPN5P54829 565 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 GSCP56915 257 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 DEUP1Q05D60 604 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 GRAMD4Q6IC98 578 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 ZNF557Q8N988 423 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 BHMTQ93088 406 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 WDCPQ9H6R7 721 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 FBRSL1Q9HCM7 1045 aaKnown RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 METTL5Q9NRN9 209 aaKnown RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
MRPL55-202ENST00000336300 PLK2Q9NYY3 685 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 TMEM59LQ9UK28 342 aa16.41■□□□□ 0.22
MRPL55-202ENST00000336300 A0A0A0MRY4 1105 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 SIGLEC16A6NMB1 481 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 KCNU1A8MYU2 1149 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 TSPAN3O60637 253 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 RTN2O75298 545 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-202ENST00000336300 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 SDC4P31431 198 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 DGKGP49619 791 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 CCR3P51677 355 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 MTAPQ13126 283 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 GAB4Q2WGN9 574 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 ACBD5Q5T8D3 534 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-202ENST00000336300 FYB2Q5VWT5 728 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 DNAJC24Q6P3W2 148 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 DCUN1D2Q6PH85 259 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 SPEM1Q8N4L4 309 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 C3orf20Q8ND61 904 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 TRIM11Q96F44 468 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 PGAP3Q96FM1 320 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-202ENST00000336300 NPY6RQ99463 290 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 SYT11Q9BT88 431 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 SLC2A11Q9BYW1 496 aa16.4■□□□□ 0.22
MRPL55-202ENST00000336300 ARIH1Q9Y4X5 557 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-202ENST00000336300 MIA3Q5JRA6 1907 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 RNF40O75150 1001 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 FTLP02792 175 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-202ENST00000336300 FLT3P36888 993 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 CXCL12P48061 93 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 PITX1P78337 314 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-202ENST00000336300 KDSRQ06136 332 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 PTP4A2Q12974 167 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 EIF4EBP2Q13542 120 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-202ENST00000336300 E2F5Q15329 346 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 ANGPT1Q15389 498 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 BRMS1LQ5PSV4 323 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 MPP7Q5T2T1 576 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 PIK3R6Q5UE93 754 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 E4F1Q66K89 784 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-202ENST00000336300 NAIF1Q69YI7 327 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-202ENST00000336300 C12orf40Q86WS4 652 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 CNGA4Q8IV77 575 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 NT5C3BQ969T7 300 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 COL4A3Q01955 1670 aa16.39■□□□□ 0.21
MRPL55-202ENST00000336300 GOLGA6L7A0A1B0GV03 622 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 F5H5T6 163 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 DDX3XO00571 662 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■■■■□ 21.3
MRPL55-202ENST00000336300 MYBL1P10243 752 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 HNRNPH3P31942 346 aaKnown RBP16.38■□□□□ 0.21
MRPL55-202ENST00000336300 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
MRPL55-202ENST00000336300 MRPS21P82921 87 aaKnown RBP16.38■□□□□ 0.21
MRPL55-202ENST00000336300 ARL13BQ3SXY8 428 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 TMC6Q7Z403 805 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 TRMT11Q7Z4G4 463 aaKnown RBP16.38■□□□□ 0.21
MRPL55-202ENST00000336300 CHSY1Q86X52 802 aa16.38■□□□□ 0.21
MRPL55-202ENST00000336300 EMC1Q8N766 993 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms