RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 IGLV3-27P01718 113 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 CXCR3P49682 368 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 PSEN1P49768 467 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 ADCY2Q08462 1091 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 MMRN1Q13201 1228 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 PIGHQ14442 188 aaPredicted RBP17.15■□□□□ 0.34
SHOX-201ENST00000334060 ATAT1Q5SQI0 421 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 PIK3R6Q5UE93 754 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 RFWD3Q6PCD5 774 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 DENND1CQ8IV53 801 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 MAFAQ8NHW3 353 aaPredicted RBP17.15■□□□□ 0.34
SHOX-201ENST00000334060 ASIC4Q96FT7 647 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 GCNAQ96QF7 691 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 CFAP97Q9P2B7 532 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 LEFTY2O00292 366 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 IL9P15248 144 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 SLC6A4P31645 630 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 TUBP50607 506 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 ITIH3Q06033 890 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 TANGO2Q6ICL3 276 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 CES5AQ6NT32 575 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 PARM1Q6UWI2 310 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 BEND5Q7L4P6 421 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 CIR1Q86X95 450 aaPredicted RBP17.15■□□□□ 0.34
SHOX-201ENST00000334060 RNF10Q8N5U6 811 aaKnown RBP17.15■□□□□ 0.34
SHOX-201ENST00000334060 SH3RF2Q8TEC5 729 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 FGF14Q92915 247 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 BHMTQ93088 406 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 PGAP3Q96FM1 320 aaPredicted RBP17.15■□□□□ 0.34
SHOX-201ENST00000334060 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
SHOX-201ENST00000334060 HELZP42694 1942 aaKnown RBP17.14■□□□□ 0.33
SHOX-201ENST00000334060 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 KCNU1A8MYU2 1149 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 SRGAP2BP0DMP2 458 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 CORO1AP31146 461 aaKnown RBP17.14■□□□□ 0.33
SHOX-201ENST00000334060 GBP2P32456 591 aaPredicted RBP17.14■□□□□ 0.33
SHOX-201ENST00000334060 TRIP4Q15650 581 aaPredicted RBP17.14■□□□□ 0.33
SHOX-201ENST00000334060 MEI1Q5TIA1 1274 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 TRIM68Q6AZZ1 485 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 STRADAQ7RTN6 431 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 PEX26Q7Z412 305 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 BBS7Q8IWZ6 715 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 HLA-CQ95604 372 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 RNF34Q969K3 372 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 ASB16Q96NS5 453 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 SERPINB11Q96P15 392 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 KCTD15Q96SI1 283 aaPredicted RBP17.14■□□□□ 0.33
SHOX-201ENST00000334060 KXD1Q9BQD3 176 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 LINC00597Q9H2U6 94 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 TLR6Q9Y2C9 796 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 COL4A3Q01955 1670 aa17.14■□□□□ 0.33
SHOX-201ENST00000334060 ZNF185O15231 689 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 PAGE1O75459 146 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 AVPR1AP37288 418 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 PEX5P50542 639 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
SHOX-201ENST00000334060 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHOX-201ENST00000334060 AGO1Q9UL18 857 aaKnown RBP17.13■□□□□ 0.33
SHOX-201ENST00000334060 FZD10Q9ULW2 581 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 NEU3Q9UQ49 428 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 HS3ST4Q9Y661 456 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 CCDC66A2RUB6 948 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 C2CD4DB7Z1M9 353 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 ADRA1BP35368 520 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 SLC7A9P82251 487 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 GRM2Q14416 872 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 FAM133BQ5BKY9 247 aaKnown RBP17.13■□□□□ 0.33
SHOX-201ENST00000334060 RAP1GAP2Q684P5 730 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 LRRN4Q8WUT4 740 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 HES6Q96HZ4 224 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 ARHGEF38Q9NXL2 777 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 WNT6Q9Y6F9 365 aa17.13■□□□□ 0.33
SHOX-201ENST00000334060 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
SHOX-201ENST00000334060 KIF5CO60282 957 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 TSPAN3O60637 253 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 RNF8O76064 485 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 PYGMP11217 842 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 MAN1A1P33908 653 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 PPP3CCP48454 512 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 KLHDC10Q6PID8 442 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 TP53INP2Q8IXH6 220 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 COG1Q8WTW3 980 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
SHOX-201ENST00000334060 DHX35Q9H5Z1 703 aaKnown RBP17.12■□□□□ 0.33
SHOX-201ENST00000334060 TDP1Q9NUW8 608 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 CDH7Q9ULB5 785 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
SHOX-201ENST00000334060 TCRBV7S2A1N4TA0A589 114 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
SHOX-201ENST00000334060 ZNF197O14709 1029 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 PRPSAP2O60256 369 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 IL4RP24394 825 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
SHOX-201ENST00000334060 PCK1P35558 622 aa17.11■□□□□ 0.33
SHOX-201ENST00000334060 ZNF77Q15935 545 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms