RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SNNO75324 88 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-201ENST00000333371 TGM2P21980 687 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 SESN2P58004 480 aaPredicted RBP12.72□□□□□ -0.37
VPS33B-201ENST00000333371 AP1B1Q10567 949 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 STX3Q13277 289 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 FASTKD1Q53R41 847 aaKnown RBP12.72□□□□□ -0.37
VPS33B-201ENST00000333371 PPM1JQ5JR12 505 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 CCDC185Q8N715 623 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 NDRG1Q92597 394 aaKnown RBP12.72□□□□□ -0.37
VPS33B-201ENST00000333371 LGMNQ99538 433 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 WWP1Q9H0M0 922 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 DPEP3Q9H4B8 488 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 ZNF358Q9NW07 568 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
VPS33B-201ENST00000333371 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 SMIM24O75264 130 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 C22orf31O95567 290 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 IL1BP01584 269 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 INSRRP14616 1297 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 ARRB2P32121 409 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 SLC26A2P50443 739 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 GTF2A2P52657 109 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 PDK2Q15119 407 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 LRRC36Q1X8D7 754 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 BOLA3Q53S33 107 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 C1orf146Q5VVC0 180 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 OR52E8Q6IFG1 317 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 PPP1R14CQ8TAE6 165 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 TEKT4Q8WW24 435 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.37
VPS33B-201ENST00000333371 XAB2Q9HCS7 855 aaKnown RBP12.71□□□□□ -0.37
VPS33B-201ENST00000333371 TAGLN3Q9UI15 199 aa12.71□□□□□ -0.37
VPS33B-201ENST00000333371 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.38
VPS33B-201ENST00000333371 TPP1O14773 563 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ADCY6O43306 1168 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 MAP3K7O43318 606 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 HBP1O60381 514 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ALDOAP04075 364 aaKnown RBP12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ZCCHC18P0CG32 403 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ANPEPP15144 967 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 VAV1P15498 845 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 L1CAMP32004 1257 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 CRHR1P34998 444 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 GJA5P36382 358 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 MAGEA3P43357 314 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 RAP1GDS1P52306 607 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 CCNA1P78396 465 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 SLC6A3Q01959 620 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 GLRA4Q5JXX5 417 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 N4BP2L1Q5TBK1 243 aaPredicted RBP12.71□□□□□ -0.38
VPS33B-201ENST00000333371 LGSNQ5TDP6 509 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 IRGCQ6NXR0 463 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ARMCX2Q7L311 632 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 KIF12Q96FN5 646 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ATXN7L3BQ96GX2 97 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 ACSS2Q9NR19 701 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 PNPOQ9NVS9 261 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 GINS2Q9Y248 185 aa12.71□□□□□ -0.38
VPS33B-201ENST00000333371 TM7SF2O76062 418 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SKIP12755 728 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 LCP1P13796 627 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 GOT1P17174 413 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PDE1BQ01064 536 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SOWAHAQ2M3V2 549 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 IZUMO2Q6UXV1 221 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 MAVSQ7Z434 540 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 CCNJLQ8IV13 435 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 KCTD15Q96SI1 283 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF184Q99676 751 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 HESX1Q9UBX0 185 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PCDHA11Q9Y5I1 949 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SYNJ2BP-COX16A0A087WUM0 186 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SDR42E2A6NKP2 422 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 MAGEC1O60732 1142 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 ZMPSTE24O75844 475 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PDE5AO76074 875 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 GNAT1P11488 350 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 ABCG1P45844 678 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PDE1CQ14123 709 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PPFIBP2Q8ND30 876 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 HIPK4Q8NE63 616 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PYDC1Q8WXC3 89 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 MOCOSQ96EN8 888 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms