RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ANKRD52Q8NB46 1076 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 STKLD1Q8NE28 680 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 DTX3LQ8TDB6 740 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 DEPDC1BQ8WUY9 529 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 NRG4Q8WWG1 115 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 HTR3CQ8WXA8 447 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 FRMD8Q9BZ67 464 aaPredicted RBP13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 ITM2AO43736 263 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 MFSD11O43934 449 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 ALDOAP04075 364 aaKnown RBP13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 YY1P25490 414 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 GNL1P36915 607 aaPredicted RBP13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 NDUFV1P49821 464 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 HIC1Q14526 733 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 CRYMQ14894 314 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 ALKAL1Q6UXT8 129 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 TTC39CQ8N584 583 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 SHKBP1Q8TBC3 707 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 TMEM40Q8WWA1 233 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 CLPTM1LQ96KA5 538 aa13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 PPARGC1AQ9UBK2 798 aaKnown RBP13.85□□□□□ -0.19
TUBA1B-201ENST00000332858 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 CAPN14A8MX76 684 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 I3L4J1 428 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 CLDN5O00501 218 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 GPR32O75388 356 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 IL1BP01584 269 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 BPGMP07738 259 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 SETSIPP0DME0 302 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 TPSB2P20231 275 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 GTF2A2P52657 109 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 KDSRQ06136 332 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 BST2Q10589 180 aaKnown RBP13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 TPSAB1Q15661 275 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 ARHGAP17Q68EM7 881 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 SLC27A1Q6PCB7 646 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 DEFB106AQ8N104 65 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 COLGALT1Q8NBJ5 622 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 ARNTL2Q8WYA1 636 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 FAM149B1Q96BN6 582 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 LRRC39Q96DD0 335 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 C7orf26Q96N11 449 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 OLFM3Q96PB7 478 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 EMCNQ9ULC0 261 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 SUFUQ9UMX1 484 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 B2RBV5 119 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 H3BRJ5 948 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 DGKIO75912 1065 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 AMHP03971 560 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 MMP3P08254 477 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 MGAT1P26572 445 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 CRHR1P34998 444 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 RCN2Q14257 317 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 RCN1Q15293 331 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 OTUD1Q5VV17 481 aaPredicted RBP13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 GPRC5AQ8NFJ5 357 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 MCUR1Q96AQ8 359 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 ZNF778Q96MU6 729 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 DCLRE1BQ9H816 532 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 CACNG4Q9UBN1 327 aa13.84□□□□□ -0.19
TUBA1B-201ENST00000332858 SNNO75324 88 aaPredicted RBP13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 ALDH18A1P54886 795 aaKnown RBP13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 AP1B1Q10567 949 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 UBAP2LQ14157 1087 aaKnown RBP13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 KRT72Q14CN4 511 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 DCAF6Q58WW2 860 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 FBXO47Q5MNV8 452 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 TFB1MQ8WVM0 346 aaKnown RBP13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 VTA1Q9NP79 307 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 KCNK4Q9NYG8 393 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 SEPT10Q9P0V9 454 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 SBF1O95248 1867 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 NUP205Q92621 2012 aa13.83□□□□□ -0.19
TUBA1B-201ENST00000332858 SMIM28A0A1B0GU29 152 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 KPNA7A9QM74 516 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 TBX10O75333 385 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 NR2C2P49116 596 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 DCAF4L1Q3SXM0 396 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 PIGZQ86VD9 579 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 UNC93AQ86WB7 457 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 TEX9Q8N6V9 391 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 RNF169Q8NCN4 708 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 RBM15BQ8NDT2 890 aaKnown RBP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 BEST2Q8NFU1 509 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 P2RY11Q96G91 374 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 PLEKHA5Q9HAU0 1116 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 COL1A2P08123 1366 aa13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 DICER1Q9UPY3 1922 aaKnown RBP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
TUBA1B-201ENST00000332858 PIRO00625 290 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms