RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 IQCF2Q8IXL9 164 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 ATP6V0A1Q93050 837 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 COX4I2Q96KJ9 171 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 R3HDMLQ9H3Y0 253 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 ZNF696Q9H7X3 374 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 THAP1Q9NVV9 213 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 C6orf203Q9P0P8 240 aaPredicted RBP18.7■□□□□ 0.58
PKP3-201ENST00000331563 ZNF112Q9UJU3 913 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 PSMD13Q9UNM6 376 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 CEPT1Q9Y6K0 416 aa18.7■□□□□ 0.58
PKP3-201ENST00000331563 E7ESA3 106 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 CST8O60676 142 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ZBED1O96006 694 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 CCNE2O96020 404 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 S100A1P23297 94 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 TGFBIQ15582 683 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 TREML2Q5T2D2 321 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 PLEKHA7Q6IQ23 1121 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 BORAQ6PGQ7 559 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 C16orf87Q6PH81 154 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 TMEM270Q6UE05 265 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 USP37Q86T82 979 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 GPC2Q8N158 579 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ITPKCQ96DU7 683 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 CGREF1Q99674 301 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ITGA11Q9UKX5 1188 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 UBIAD1Q9Y5Z9 338 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ZNFX1Q9P2E3 1918 aaKnown RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 USP2O75604 605 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 ITGAXP20702 1163 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 GNA15P30679 374 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 RAB15P59190 212 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 NOMO3P69849 1222 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 GCNT1Q02742 428 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 BRDTQ58F21 947 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 ERI1Q8IV48 349 aaKnown RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 SLC35B2Q8TB61 432 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 KCNK16Q96T55 309 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 HEPHQ9BQS7 1158 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 COPS7BQ9H9Q2 264 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 PCDHB4Q9Y5E5 795 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 GPC6Q9Y625 555 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 BRCA2P51587 3418 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 RBP3P10745 1247 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 CDKN2BP42772 138 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 ATXN3P54252 364 aaPredicted RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 MRPS22P82650 360 aaKnown RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 VGLL4Q14135 290 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 UNC45BQ8IWX7 931 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 PIWIL2Q8TC59 973 aaKnown RBP18.69■□□□□ 0.58
PKP3-201ENST00000331563 KIFC3Q9BVG8 833 aa18.69■□□□□ 0.58
PKP3-201ENST00000331563 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 FUOMA2VDF0 154 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 BPGMP07738 259 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 MROH9Q5TGP6 573 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 SPOPLQ6IQ16 392 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 DRC3Q9H069 523 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 SPON1Q9HCB6 807 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 COL11A1P12107 1806 aaPredicted RBP18.68■□□□□ 0.58
PKP3-201ENST00000331563 CCDC162PA2VCL2 907 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 ADCY6O43306 1168 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 TOP3BO95985 862 aaKnown RBP18.68■□□□□ 0.58
PKP3-201ENST00000331563 CD48P09326 243 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 TFPTP0C1Z6 253 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 ENTPD1P49961 510 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 ARPC4P59998 168 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 ZNF423Q2M1K9 1284 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 KCNT1Q5JUK3 1230 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 FRMD7Q6ZUT3 714 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 SDR16C5Q8N3Y7 309 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 RIT2Q99578 217 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 HAUS8Q9BT25 410 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 NRDE2Q9H7Z3 1164 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 AS3MTQ9HBK9 375 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 ARHGAP26Q9UNA1 814 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 COQ6Q9Y2Z9 468 aa18.68■□□□□ 0.58
PKP3-201ENST00000331563 NR3C2P08235 984 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 PDPK2PQ6A1A2 396 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 POTEHQ6S545 545 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 POLNQ7Z5Q5 900 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 TMIGD2Q96BF3 282 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 CXorf49A8MYA2 514 aaPredicted RBP18.67■□□□□ 0.58
PKP3-201ENST00000331563 ITM2AO43736 263 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 SNNO75324 88 aaPredicted RBP18.67■□□□□ 0.58
PKP3-201ENST00000331563 MSX2P35548 267 aaPredicted RBP18.67■□□□□ 0.58
PKP3-201ENST00000331563 C6orf183Q5T699 404 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 FAM102BQ5T8I3 360 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 DNAJC24Q6P3W2 148 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 ABRAQ8N0Z2 381 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 REPS2Q8NFH8 660 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 TSPAN14Q8NG11 270 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 CLIP3Q96DZ5 547 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 TPK1Q9H3S4 243 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 EXOC7Q9UPT5 735 aa18.67■□□□□ 0.58
PKP3-201ENST00000331563 A0A1B0GTW7 788 aa18.66■□□□□ 0.58
PKP3-201ENST00000331563 DCXO43602 365 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms