RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 UBE2HP62256 183 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 GRSF1Q12849 480 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMG1-201ENST00000330588 MORC3Q14149 939 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 CCDC142Q17RM4 750 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 PREPLQ4J6C6 727 aaPredicted RBP6.69□□□□□ -1.34
SMG1-201ENST00000330588 SDHAF4Q5VUM1 108 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 ARHGAP17Q68EM7 881 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 XKR5Q6UX68 686 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 CLEC17AQ6ZS10 378 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 SCML4Q8N228 414 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 TAS1R2Q8TE23 839 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 SLC35C1Q96A29 364 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 CDK5RAP1Q96SZ6 601 aaKnown RBP6.69□□□□□ -1.34
SMG1-201ENST00000330588 ZNF518BQ9C0D4 1074 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 EPC1Q9H2F5 836 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 LMAN1LQ9HAT1 526 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 APOBEC3GQ9HC16 384 aaKnown RBP6.69□□□□□ -1.34
SMG1-201ENST00000330588 TLR8Q9NR97 1041 aaKnown RBP6.69□□□□□ -1.34
SMG1-201ENST00000330588 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 TMEM30AQ9NV96 361 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 RAB20Q9NX57 234 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 CHMP5Q9NZZ3 219 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
SMG1-201ENST00000330588 KIAA1257Q9ULG3 409 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 SCML2Q9UQR0 700 aa6.69□□□□□ -1.34
SMG1-201ENST00000330588 KIAA1549LQ6ZVL6 1849 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 C2orf78A6NCI8 922 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 HHLA1C9JL84 531 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 LRP3O75074 770 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TNFRSF21O75509 655 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 FGFR1OPO95684 399 aaKnown RBP6.68□□□□□ -1.34
SMG1-201ENST00000330588 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
SMG1-201ENST00000330588 CKMP06732 381 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 FAM200BP0CF97 657 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TRIM49P0CI25 452 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TRIM49CP0CI26 452 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 CXCL12P48061 93 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 GCLMP48507 274 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 IFNAR2P48551 515 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 CDH8P55286 799 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TAF10Q12962 218 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 MTAPQ13126 283 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 STILQ15468 1287 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 MEA1Q16626 185 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ANKRD40Q6AI12 368 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TTI2Q6NXR4 508 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ASCL5Q7RTU5 278 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 CCDC186Q7Z3E2 898 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ZNF438Q7Z4V0 828 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 TADA2BQ86TJ2 420 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ACOT1Q86TX2 421 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 CAMKK1Q8N5S9 505 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ARL14EPQ8N8R7 260 aaPredicted RBP6.68□□□□□ -1.34
SMG1-201ENST00000330588 SUMF1Q8NBK3 374 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 GALNT11Q8NCW6 608 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ZMIZ2Q8NF64 920 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 SH3RF2Q8TEC5 729 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ATRIPQ8WXE1 791 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 FBXO32Q969P5 355 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 JAKMIP2Q96AA8 810 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 FAM81BQ96LP2 452 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 SLC22A12Q96S37 553 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 SMOQ99835 787 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 MED10Q9BTT4 135 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ECT2Q9H8V3 914 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 FAM86C1Q9NVL1 165 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 DUS2Q9NX74 493 aaKnown RBP6.68□□□□□ -1.34
SMG1-201ENST00000330588 GTSE1Q9NYZ3 720 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 MAN1B1Q9UKM7 699 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 NDRG2Q9UN36 371 aaKnown RBP6.68□□□□□ -1.34
SMG1-201ENST00000330588 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 CCL26Q9Y258 94 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 ZDBF2Q9HCK1 2354 aa6.68□□□□□ -1.34
SMG1-201ENST00000330588 MUC6Q6W4X9 2439 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 LEFTY2O00292 366 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CLDN5O00501 218 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 FOXD2O60548 495 aaPredicted RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 LRRN2O75325 713 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 PAEPP09466 180 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CD72P21854 359 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 GJA4P35212 333 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CACNA2D1P54289 1103 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CSTF1Q05048 431 aaKnown RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 GOLGA8FQ08AF8 430 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 GOLGA8DPQ0D2H9 430 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CETN1Q12798 172 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 RAB41Q5JT25 222 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 HECTD3Q5T447 861 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 TXNDC11Q6PKC3 985 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 SCARA5Q6ZMJ2 495 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 CLEC20AQ6ZU45 233 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 WDR5BQ86VZ2 330 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 SMYD4Q8IYR2 804 aaPredicted RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
SMG1-201ENST00000330588 ARHGAP18Q8N392 663 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 UBR7Q8N806 425 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 ST13P5Q8NFI4 369 aaPredicted RBP6.67□□□□□ -1.34
SMG1-201ENST00000330588 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
SMG1-201ENST00000330588 SLC2A14Q8TDB8 520 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms