RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 A0A087WUV0 522 aaPredicted RBP17.53■□□□□ 0.4
DDX41-201ENST00000330503 C5orf60A6NFR6 353 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 FGFR3P22607 806 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 GCAP28676 217 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 MAGEA6P43360 314 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 MMP13P45452 471 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 HCAR3P49019 387 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 YWHAGP61981 247 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX41-201ENST00000330503 CBLBQ13191 982 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 SDHAF4Q5VUM1 108 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 FAM43BQ6ZT52 329 aaPredicted RBP17.53■□□□□ 0.4
DDX41-201ENST00000330503 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 CEP57Q86XR8 500 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 NPAS4Q8IUM7 802 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 TP53INP2Q8IXH6 220 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 MDM1Q8TC05 714 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 LGMNQ99538 433 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 HIPK3Q9H422 1215 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 WDCPQ9H6R7 721 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 ETNK1Q9HBU6 452 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 EURLQ9NYK6 297 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 LGALS13Q9UHV8 139 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 FOXO6A8MYZ6 492 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 HACD1B0YJ81 288 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 METTL18O95568 372 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 LSP1P33241 339 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 GPR15P49685 360 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 IFRD2Q12894 506 aaPredicted RBP17.53■□□□□ 0.4
DDX41-201ENST00000330503 CTXN3Q4LDR2 81 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 CCDC38Q502W7 563 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 FAXCQ5TGI0 409 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 IGDCC3Q8IVU1 814 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
DDX41-201ENST00000330503 CCDC77Q9BR77 488 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 TKTL2Q9H0I9 626 aa17.53■□□□□ 0.4
DDX41-201ENST00000330503 E7EVH7 732 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 GALTP07902 379 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 ERCC2P18074 760 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 CYP2C18P33260 490 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 TLE2Q04725 743 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 MTM1Q13496 603 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 NFE2Q16621 373 aaPredicted RBP17.52■□□□□ 0.4
DDX41-201ENST00000330503 DDR2Q16832 855 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 ARL13BQ3SXY8 428 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 BBS9Q3SYG4 887 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 LEKR1Q6ZMV7 388 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 STKLD1Q8NE28 680 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 PYROXD1Q8WU10 500 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 FUBP3Q96I24 572 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX41-201ENST00000330503 C8orf48Q96LL4 319 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 STMN4Q9H169 189 aaPredicted RBP17.52■□□□□ 0.4
DDX41-201ENST00000330503 VPS37BQ9H9H4 285 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 NMUR1Q9HB89 426 aa17.52■□□□□ 0.4
DDX41-201ENST00000330503 SF3B1O75533 1304 aaKnown RBP eCLIP17.52■□□□□ 0.394e-7■■■■■ 133.7
DDX41-201ENST00000330503 NT5C1B-RDH14C9J2C7 533 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 PRKD1Q15139 912 aaPredicted RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 RSPO2Q6UXX9 243 aaPredicted RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 C4orf22Q6V702 233 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 CAPN12Q6ZSI9 719 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 BZW1Q7L1Q6 419 aaKnown RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 PDIK1LQ8N165 341 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 AGGF1Q8N302 714 aaeCLIP17.51■□□□□ 0.39
DDX41-201ENST00000330503 HTR3CQ8WXA8 447 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 ABCC13Q9NSE7 274 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 TBC1D4O60343 1298 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 AVILO75366 819 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 PBX3P40426 434 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 HEATR6Q6AI08 1181 aaKnown RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 VSTM1Q6UX27 236 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 TAS1R1Q7RTX1 841 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 TMEM173Q86WV6 379 aaPredicted RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 ATAD1Q8NBU5 361 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 FBXO36Q8NEA4 188 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 PGLYRP2Q96PD5 576 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 TRIM62Q9BVG3 475 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 CRISPLD2Q9H0B8 497 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 CNOT10Q9H9A5 744 aaKnown RBP17.51■□□□□ 0.39
DDX41-201ENST00000330503 OSER1Q9NX31 292 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 OR12D3Q9UGF7 316 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
DDX41-201ENST00000330503 A0A1W2PQH9 124 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 OR6C75A6NL08 312 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 HOXA2O43364 376 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 IVLP07476 585 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 CREB1P16220 341 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 SSTR1P30872 391 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 MAGEA11P43364 429 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 BTBD8Q5XKL5 378 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 FUT10Q6P4F1 479 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 FOXR1Q6PIV2 292 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 DEFB128Q7Z7B8 93 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 CAND1Q86VP6 1230 aaKnown RBP17.5■□□□□ 0.39
DDX41-201ENST00000330503 TTC9BQ8N6N2 239 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 BCL7CQ8WUZ0 217 aaPredicted RBP17.5■□□□□ 0.39
DDX41-201ENST00000330503 MAML1Q92585 1016 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 CASP10Q92851 521 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms