RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SAT1P21673 171 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 DNAJB2P25686 324 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 SFNP31947 248 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 FDFT1P37268 417 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 GTF2A2P52657 109 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 BCAR1P56945 870 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 OR6B2Q6IFH4 312 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ATG14Q6ZNE5 492 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 CAND1Q86VP6 1230 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 RAB3IL1Q8TBN0 382 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TFB1MQ8WVM0 346 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 NTPCRQ9BSD7 190 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 MAGEB5Q9BZ81 275 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TDRKHQ9Y2W6 561 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 SIPA1L1O43166 1804 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TCRBV5S1A1TA0A578 114 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 IDH3AP50213 366 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 WASHC5Q12768 1159 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PPP2R5DQ14738 602 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PPM1LQ5SGD2 360 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TEDDM1Q5T9Z0 273 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 UGT2A3Q6UWM9 527 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 KYAT3Q6YP21 454 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 MAVSQ7Z434 540 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 AMIGO2Q86SJ2 522 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 METTL25Q8N6Q8 603 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 NCSTNQ92542 709 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 DGCR14Q96DF8 476 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 WNK4Q96J92 1243 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PIWIL1Q96J94 861 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 KLC2Q9H0B6 622 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 RBBP6Q7Z6E9 1792 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 WDR27A2RRH5 827 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 SLC15A5A6NIM6 579 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 M0QYV0 167 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 VILLO15195 856 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ENO3P13929 434 aaPredicted RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 PCSK6P29122 969 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 EN1Q05925 392 aaPredicted RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 NRF1Q16656 503 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 MAP7D3Q8IWC1 876 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 FAM156AQ8NDB6 213 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ZFP28Q8NHY6 868 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ZSCAN18Q8TBC5 510 aaPredicted RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 ADAMTS19Q8TE59 1207 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TMEM174Q8WUU8 243 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PLAC1Q9HBJ0 212 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 SH3BP1Q9Y3L3 701 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ZNF711Q9Y462 761 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 RIPK3Q9Y572 518 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 H3BSA7 217 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PRPSAP2O60256 369 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 KLHL2O95198 593 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TRUB2O95900 331 aaKnown RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 AMHP03971 560 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TFAP2AP05549 437 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 NR3C2P08235 984 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 NPR1P16066 1061 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 PDGFRAP16234 1089 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 AOC1P19801 751 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 TPP2P29144 1249 aaPredicted RBP8.12□□□□□ -1.11
VMA21-201ENST00000330374 PGGT1BP53609 377 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 MYLK3Q32MK0 819 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 NXNQ6DKJ4 435 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 AAGABQ6PD74 315 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 B3GNT6Q6ZMB0 384 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 CMC1Q7Z7K0 106 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.12□□□□□ -1.11
VMA21-201ENST00000330374 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 ANLNQ9NQW6 1124 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 AP4B1Q9Y6B7 739 aa8.12□□□□□ -1.11
VMA21-201ENST00000330374 STX16-NPEPL1H3BU86 382 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SPTLC1O15269 473 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SNNO75324 88 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 ENTPD3O75355 529 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TMCC1O94876 653 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 METTL18O95568 372 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ASS1P00966 412 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 PSAPP07602 524 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SMIM18P0DKX4 95 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 FGFR3P22607 806 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ARRB2P32121 409 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ACTR2P61160 394 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SEMA6AQ9H2E6 1030 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 USP29Q9HBJ7 922 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 HERC5Q9UII4 1024 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ADCY6O43306 1168 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 DKC1O60832 514 aaKnown RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms