RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 PRKCHP24723 683 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 HARS2P49590 506 aaKnown RBP26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 TPMTP51580 245 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 YWHAEP62258 255 aaKnown RBP26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 BST2Q10589 180 aaKnown RBP26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 ENPP2Q13822 863 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 PM20D1Q6GTS8 502 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 SIX6OS1Q8N1H7 587 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 ZCCHC9Q8N567 271 aaKnown RBP26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 EDEM1Q92611 657 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 SLC2A11Q9BYW1 496 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 SFMBT1Q9UHJ3 866 aa26.18■■□□□ 1.78
PPP4R4-202ENST00000328839 SLC16A3O15427 465 aaKnown RBP26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 LRMPQ12912 555 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 GRIK2Q13002 908 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 MPPE1Q53F39 396 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 UBA3Q8TBC4 463 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 ZCCHC14Q8WYQ9 949 aaKnown RBP26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 CAMK1GQ96NX5 476 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 PCDHB9Q9Y5E1 797 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 AKAP13Q12802 2813 aa26.17■■□□□ 1.78
PPP4R4-202ENST00000328839 ASPMQ8IZT6 3477 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 A0A1B0GTW7 788 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 SH3BP5O60239 455 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 OXTRP30559 389 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 TRIP4Q15650 581 aaPredicted RBP26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 DCAF12L1Q5VU92 463 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 TMEM215Q68D42 235 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 BHLHA9Q7RTU4 235 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 FAM124AQ86V42 546 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 FAM217AQ8IXS0 508 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 CHD6Q8TD26 2715 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 IGF2RP11717 2491 aa26.16■■□□□ 1.78
PPP4R4-202ENST00000328839 YJEFN3A6XGL0 299 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 E7ENQ6 273 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 H0Y626 953 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 TRIM16O95361 564 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 HLA-EP13747 358 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 LCP1P13796 627 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 HOXD9P28356 352 aaPredicted RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 COPAP53621 1224 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 FKBP3Q00688 224 aaKnown RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 SLC14A1Q13336 389 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 HNRNPDQ14103 355 aaKnown RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 FNDC3BQ53EP0 1204 aaKnown RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 ZNF658Q5TYW1 1059 aaPredicted RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 BSPRYQ5W0U4 402 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 ANKRD40Q6AI12 368 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 CHCHD4Q8N4Q1 142 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 CADM4Q8NFZ8 388 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 COQ4Q9Y3A0 265 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 MSRB2Q9Y3D2 182 aa26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 HBS1LQ9Y450 684 aaKnown RBP26.15■■□□□ 1.78
PPP4R4-202ENST00000328839 MSI1O43347 362 aaKnown RBP26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 TIMM44O43615 452 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 GJB3O75712 270 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 VDRP11473 427 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 TRIP6Q15654 476 aaKnown RBP26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 NAXDQ8IW45 347 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 RBBP8NLQ8NC74 664 aaPredicted RBP26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 CYB5D2Q8WUJ1 264 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 DNASE2BQ8WZ79 361 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 SNX19Q92543 992 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 NUP58Q9BVL2 599 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 ZDHHC5Q9C0B5 715 aa26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 ARMCX3Q9UH62 379 aaPredicted RBP26.14■■□□□ 1.78
PPP4R4-202ENST00000328839 TRIM49BA6NDI0 452 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 GOLGA6L4A6NEF3 574 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 SETSIPP0DME0 302 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 PMS1P54277 932 aaKnown RBP26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 ZNF423Q2M1K9 1284 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 ZNF366Q8N895 744 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 ERCC4Q92889 916 aaPredicted RBP26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 TMA16Q96EY4 203 aaKnown RBP26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 ABCC13Q9NSE7 274 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 NFE2L3Q9Y4A8 694 aa26.13■■□□□ 1.77
PPP4R4-202ENST00000328839 MUC22E2RYF6 1773 aaPredicted RBP26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 METTL12A8MUP2 240 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 O00370 1275 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 PIK3R2O00459 728 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 BCAT2O15382 392 aaPredicted RBP26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 SMC2O95347 1197 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 TBXAS1P24557 533 aaPredicted RBP26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 HLA-FP30511 346 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 RGS7P49802 495 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 ZNF445P59923 1031 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 ADGRF1Q5T601 910 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 CHST9Q7L1S5 443 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 FMR1NBQ8N0W7 255 aaPredicted RBP26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 OR2T3Q8NH03 318 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 SLC35C1Q96A29 364 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 GSDMAQ96QA5 445 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 ABCB8Q9NUT2 735 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 EIF2B4Q9UI10 523 aaKnown RBP26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 PLA2G4CQ9UP65 541 aa26.12■■□□□ 1.77
PPP4R4-202ENST00000328839 NUMA1Q14980 2115 aa26.11■■□□□ 1.77
PPP4R4-202ENST00000328839 WDFY3Q8IZQ1 3526 aa26.11■■□□□ 1.77
PPP4R4-202ENST00000328839 TMEM270Q6UE05 265 aa26.11■■□□□ 1.77
PPP4R4-202ENST00000328839 ZC3H3Q8IXZ2 948 aaKnown RBP26.11■■□□□ 1.77
PPP4R4-202ENST00000328839 WFIKKN2Q8TEU8 576 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms