RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 F11P03951 625 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM153BP0C7A2 387 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 MIPP30301 263 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 CDKN2BP42772 138 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 CBX1P83916 185 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM153CQ494X1 144 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 BNIPLQ7Z465 357 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 ATL2Q8NHH9 583 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 RNF139Q8WU17 664 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 RAPGEF5Q92565 580 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 CASP10Q92851 521 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 ZNF707Q96C28 371 aaPredicted RBP19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 DPH5Q9H2P9 285 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM204AQ9H8W3 233 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 COX16Q9P0S2 106 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM153AQ9UHL3 310 aa19.47■□□□□ 0.71
EXOSC3-201ENST00000327304 hCG_1818297A0A087WSY0 165 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 PI4K2BG5E9Z4 385 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 NRG2O14511 850 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 MDM4O15151 490 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 GLP2RO95838 553 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 TRUB2O95900 331 aaKnown RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 IL1R2P27930 398 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 NME3Q13232 169 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ADGRE1Q14246 886 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 LLGL1Q15334 1064 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 TAZQ16635 292 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 SNX30Q5VWJ9 437 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ALS2CLQ60I27 953 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 MSANTD2Q6P1R3 559 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 DRICH1Q6PGQ1 229 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ELMSAN1Q6PJG2 1045 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 GAREM2Q75VX8 874 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 STRADAQ7RTN6 431 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ANKS1BQ7Z6G8 1248 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 CMASQ8NFW8 434 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 PEBP4Q96S96 227 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 PRKD2Q9BZL6 878 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 SMOC2Q9H3U7 446 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 MED4Q9NPJ6 270 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ASAH2Q9NR71 780 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 KLHL11Q9NVR0 708 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 DDIT4Q9NX09 232 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 RRN3Q9NYV6 651 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 LMCD1Q9NZU5 365 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 PCSK1NQ9UHG2 260 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 SFMBT1Q9UHJ3 866 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 USP18Q9UMW8 372 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 DOCK6Q96HP0 2047 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 CCDC195A0A1B0GUA6 201 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 LRRD1A4D1F6 860 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 C3orf70A6NLC5 250 aaPredicted RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 TLR5O60602 858 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ENDOD1O94919 500 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 GABRR2P28476 465 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 HSPA9P38646 679 aaKnown RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 KCNJ1P48048 391 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 C10orf120Q5SQS8 335 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 LRRC45Q96CN5 670 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 FAM161BQ96MY7 647 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 ZWILCHQ9H900 591 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 PIGVQ9NUD9 493 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 DNMT3BQ9UBC3 853 aaKnown RBP19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 MTCH2Q9Y6C9 303 aa19.46■□□□□ 0.71
EXOSC3-201ENST00000327304 OBSL1O75147 1896 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 REV3LO60673 3130 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 MSI1O43347 362 aaKnown RBP19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 XYLBO75191 536 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 IGLV3-25P01717 112 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 MYL4P12829 197 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 KDELR1P24390 212 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 RDXP35241 583 aaKnown RBP19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 LMNB2Q03252 620 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 DEUP1Q05D60 604 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 EFEMP1Q12805 493 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 SCYL2Q6P3W7 929 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 CYP4V2Q6ZWL3 525 aaPredicted RBP19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 FAM131BQ86XD5 332 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 EFHBQ8N7U6 833 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 NEUROG2Q9H2A3 272 aa19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 R3HDM2Q9Y2K5 976 aaKnown RBP19.45■□□□□ 0.7
EXOSC3-201ENST00000327304 ANAPC1Q9H1A4 1944 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 C2orf78A6NCI8 922 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 GAS8O95995 478 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 POU2F2P09086 479 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 KRT10P13645 584 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 PTPN2P17706 415 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 CCR2P41597 374 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 PPP3CCP48454 512 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 EPHA5P54756 1037 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 NTHL1P78549 312 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 CYP4F8P98187 520 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 HSP90B2PQ58FF3 399 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 HECTD3Q5T447 861 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 TMC5Q6UXY8 1006 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 TSEN2Q8NCE0 465 aaKnown RBP19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 ATG4AQ8WYN0 398 aa19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 ACSF2Q96CM8 615 aaPredicted RBP19.44■□□□□ 0.7
EXOSC3-201ENST00000327304 PGAP3Q96FM1 320 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms